Labrenzia sp. PHM005: FJ695_01800
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Entry
FJ695_01800 CDS
T06152
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJ695_01800 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
labp03019
]
FJ695_01800 (recQ)
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_01800 (recQ)
Enzymes [BR:
labp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJ695_01800 (recQ)
Messenger RNA biogenesis [BR:
labp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJ695_01800 (recQ)
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJ695_01800 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDG74700
UniProt:
A0A4Y6RQW9
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All DBs
Position
355006..356895
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AA seq
629 aa
AA seq
DB search
MSASPAQAAEEIPPIQVSTAPPVTGEAKPLAVLQKIFGFSEFRGKQQAVIQTLVDGKDAV
VLFPTGAGKSLCYQIPALCRRGVGIVVSPLIALMKDQVGALTAAGVKAAAFNSTLSPEEQ
ADLRAQLQRGELDLLYVTPERLSNENFRRLLDTLEIALFAIDEAHCVSQWGHDFRPEYLS
LSALVERYPGVPRVALTATADAHTQQDIQARLKLDDAEVFSTSFDRPNIRYEIVERTNQR
QQLLDFLKKHKGECGIVYCLSRAKVEDIAEWLCSKGVRALPYHAGLPTEQRAANQDAFLL
EEDLCLVATVAFGMGIDKPDVRYVAHLDLPSSVEAYYQETGRAGRDGAPSEAFMAYGMAD
LVQRRRMIAEGDAPDEVKRAENAKLNALLGICETAGCRRQALLAHFGETYPKPCGNCDTC
LSPVETWDGTEVAQKLMSAIYRTGQRFGTGHVIDVLLGKSSEKTARFGHDGLSVFGIGQD
QSQKTWQSTARQLVAAGFVDVDHAQYGALVLTEKARPVLRGEETIDLRKDRNAAGLKNTR
TSRAASLADELDQEDRLLFDRLRRLRTQIARDQNVPPYVVFPDATLAGIAAARPVTPDAL
LAVSGIGQSKLEKYGDAVLDLVEAFEVGV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttcacctgcgcaggccgcagaggaaattcctccgattcaagtttcaacggca
ccgccggtcaccggcgaggccaaacccttggctgtgcttcagaaaatcttcggcttcagc
gaattccgcggcaaacagcaggcagtcatccaaacgctggtagacggcaaagatgcggtt
gtgctgttcccgaccggtgcaggcaaatcgctttgttaccaaattcccgccttgtgccgg
cgcggtgttggtattgttgtctcgccgctgatcgccttgatgaaggaccaggtgggtgcg
ctaacggccgctggggtcaaggcggccgcatttaattccacgctcagcccagaagagcag
gcggacctgagagcgcaattgcaacgcggcgaactcgatctgctctatgtgacgccagaa
cgcctcagcaacgaaaacttccggcggcttctggatacgttggaaatcgcgctctttgcg
attgatgaggcccactgtgtcagccaatggggacacgacttccgcccggagtatctcagc
ctgtccgcccttgttgaacgctatccgggtgttccaagagttgctctgacagcaacagcc
gatgcgcacacacaacaggacatccaggcccggctgaaactggatgacgcggaggttttt
tccaccagcttcgaccggccgaacatccgctacgaaattgtcgagcgtaccaaccagcgc
cagcagcttctcgactttctgaagaaacataaaggcgagtgcggcatcgtctattgcctc
tcccgcgccaaggttgaggacattgccgaatggttatgttccaaaggggttcgtgcgctg
ccttatcacgcaggactgccaaccgagcagcgcgcggcaaatcaggatgcctttttgctg
gaagaagacttgtgccttgtcgcgacggtcgcattcggcatggggatcgacaaaccagat
gtgcggtatgtggcgcatctcgatctgccctcgtccgtcgaagcctattatcaggaaact
ggccgtgctggccgggatggtgcgccctcagaggccttcatggcttacggcatggccgac
cttgtgcagcgccggcgcatgattgccgaaggtgatgcgcccgatgaggtcaaacgggcg
gaaaacgccaaactgaatgcgctattgggtatttgcgaaacggcaggatgccgccgccaa
gcgctgctggcccattttggcgaaacttatccaaagccttgcggcaattgcgacacgtgt
ctctccccggtggaaacctgggatggcactgaagttgcccaaaaactgatgtcggcgatt
tatcgtactggccagcggttcggcaccggccatgtcatcgatgtcctgcttggtaagtcg
agcgaaaaaacagcccggtttggccatgacggcctatccgtatttggcatcggccaggat
cagtcgcagaagacatggcagtcaactgcccgccagctggtggccgccggttttgtcgac
gttgaccacgctcaatacggcgcccttgtgctgaccgaaaaggcaaggccggttttgcgc
ggcgaagaaacaatcgatctgcgcaaggatcgcaacgctgccgggctaaaaaacacacgg
acgtctcgcgcggcttcccttgccgacgagctcgaccaggaagaccgactgctgttcgac
cggttgcgccgcttgcggactcagatcgcccgggatcagaacgtcccaccctatgttgtt
tttccagatgcaacgcttgccggtatcgccgccgcccgcccagtaacgccggacgcgctc
ctcgccgtttccggcataggtcagtcaaaacttgagaaatacggcgacgccgtccttgac
cttgttgaggcctttgaagttggtgtctag
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