Labrenzia sp. PHM005: FJ695_01945
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Entry
FJ695_01945 CDS
T06152
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03030
DNA replication
labp03430
Mismatch repair
labp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJ695_01945
03430 Mismatch repair
FJ695_01945
03440 Homologous recombination
FJ695_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labp03032
]
FJ695_01945
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_01945
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJ695_01945
DNA replication proteins [BR:
labp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJ695_01945
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJ695_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_30
AAA_5
AAA_14
AAA_24
AAA_18
AAA_19
TsaE
AAA_assoc_2
Rad17
DUF815
RNA_helicase
SRP54
AAA_28
nSTAND3
CshA_NR2
TIP49_C
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
QDG74727
UniProt:
A0A4Y6RQM5
LinkDB
All DBs
Position
complement(387534..389477)
Genome browser
AA seq
647 aa
AA seq
DB search
MVRLMDETGFPQDDNETGLELTGGTGTAPGAAEGGAYRVLARKYRPKTFEDLVGQEPMVQ
TLENAFDTGRIAQAWMLTGVRGVGKTTTARILARGLNYEVPGEADKPTVKLTQEGSHCKA
IMEGRHVDVIEMDAASHTGINDIREIIDAARYRPATARYKVYIIDEVHMLSNAAFNGLLK
TLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRIEQSKLIGLLRRISDAEGIQISDE
ALMLIARAGEGSARDSLSLLDQAMAHGSGAIDANDLRQMLGLADRARVIDLFGHIMAGRI
EDALGELQAQYDIGADPAIVLTDLADFTHLVTRMKVAPKSADEASVTEAERARGQEFAEK
ISVRLLSRAWQILLKGVQEVQAASKPLSAADMVLVRLAYAADLPDPGELMAQIQNGQMPV
SGGAPAGGSTGAPAGPAGGGGQAMAVGAPSMPHGSPRGGPVMQATARPQLSAIQGGAPQT
APQQQSAPQAEQAPQQSAYNLKNLHDCVALASEKRDIPMKVAIQRQMRLVKFEPGKIEIQ
PTEDAPADIAGEFGRKLTEWTGQRWFVVVSRTQGRPTIYEEQEANQQQLLSDAKSHPTVA
ALLAQFPGAKVIDVKVQASEEDEVAMADPLVNDPLLNEALGTDDDDD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggctcatggatgagactggctttccgcaagacgataatgagaccggcctggaa
ttgacgggtggcactggaacggcaccaggcgcggccgaaggcggtgcctacagggtgctg
gcccgcaaataccgcccgaagaccttcgaggatctggttggccaggagccgatggtgcaa
acgctggagaacgcgtttgataccggacggatcgcacaggcctggatgctgaccggggtg
cgcggggtcggcaagaccacaacagcccggatcctggcgcgcggcctgaactatgaagtg
cccggcgaggcggataaaccgacggtcaagctgacccaggaaggctcgcactgtaaggcc
atcatggaaggccgccatgtcgatgttatcgagatggatgcggcctcgcacaccggcatc
aacgatatccgcgagatcatcgatgcggcccgctaccgcccggcaacggcgcggtataag
gtttacatcatcgatgaggtccacatgctctccaacgcagccttcaacgggctgttgaag
acgctcgaagagccgcctgagcatgtgaagttcatcttcgcgaccaccgaaatccgcaaa
gtcccgatcaccgtactgtcgcgttgccagcgctttgatctgcgccgcatcgagcagtct
aaactgatcggcttgctgcgccggatttctgacgccgaaggcattcaaatctccgatgaa
gccctgatgctgatcgcacgggcgggcgagggttcggctcgcgactctctgtccttgctc
gatcaggcgatggctcatggcagcggcgcgattgacgcaaatgatctgcgccaaatgctc
ggtcttgccgaccgcgcccgggtgatagacctcttcggccatatcatggccgggcggatc
gaagacgcgctgggcgaactccaagctcagtatgatatcggtgccgatcctgcgatcgtg
ttgacggatcttgccgacttcacccaccttgtgacccggatgaaggtggccccgaaatcc
gccgacgaggcctcggtgacagaagcggagcgcgcgcgcggccaggagtttgcggaaaag
atttccgtgcggctgctatcccgcgcttggcagatccttctgaaaggtgttcaagaagtg
caagccgcttccaagccattgtctgcggctgatatggttctggtgcgactggcctatgct
gccgatctgccggatccgggcgagttgatggcgcagatccaaaacggacaaatgccggtt
tctggtggtgcgccagcaggtggatctacaggagcgcccgcaggtcctgccggaggcggc
ggccaggcgatggccgttggtgctccctccatgccgcacggcagccctcggggagggcca
gtgatgcaagctactgcccggccgcagttgtcggcgatccagggtggcgctccgcagaca
gcacctcaacaacaatcggcaccacaggccgaacaggcaccgcagcaatctgcctacaat
ctgaaaaacctgcatgactgtgtcgcactggcgtctgaaaagcgcgacattccgatgaag
gttgccatccagcggcaaatgcggctggtgaagttcgagcccggcaagatcgagattcaa
ccgaccgaggatgcaccggccgatattgccggggaattcggacgcaagctgacggaatgg
accggacagcgttggttcgttgtcgtctcgcgcacgcaagggcgtccgacgatttatgaa
gagcaggaagccaaccagcagcagcttttgtcagacgccaaatcccacccgacggtggcc
gcattgctggcacagtttccgggcgccaaagtgatcgatgtcaaggtacaggcctccgaa
gaggacgaagttgcgatggccgatccgctggtcaacgatcccttgctcaacgaagcgctg
ggcacggatgacgatgacgactaa
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