Labrenzia sp. PHM005: FJ695_02120
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Entry
FJ695_02120 CDS
T06152
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labp03016
]
FJ695_02120 (truB)
Enzymes [BR:
labp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FJ695_02120 (truB)
Transfer RNA biogenesis [BR:
labp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FJ695_02120 (truB)
Prokaryotic type
FJ695_02120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDG74758
LinkDB
All DBs
Position
complement(431254..432198)
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AA seq
314 aa
AA seq
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MARKQQFKRKKNTINGWLVLDKPYGITSNEALGKIKRIFSPQKVGHAGTLDPRASGLLPV
AFGEATKTVPFVMDGRKVYRFEVTWGAETNTDDTEGEVIATSDVRPDTDAIRLVLPEFVG
EIMQVPPKFSAIKVAGERAYDLARDGEEVELEARPIDMHRLDLVECPDVNRAVFEAECGK
GTYVRALARDIGRRLGTRGHVTELRRLLVGPFGEEDLVALDEILQMAEELEEGAGVDELV
EEFVLPVREAMDELVEVTVSDDDAAKIKKGMAVLLRGRDAPLNCDVAFASHASVPVAIGA
IEKGRFQPSRVFHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaacagcaattcaaaagaaaaaagaacacgatcaacggctggctggtgctg
gacaagccctatggcatcacctccaacgaggcgcttggcaagatcaagcggatattttca
ccgcaaaaggtcggccatgctggcacgctcgatccgcgggcgtccggtctgctgccggtc
gcctttggtgaggccacgaaaacggtgccttttgtgatggacggtcgaaaggtttaccgg
ttcgaggtgacctggggcgcagaaaccaacaccgacgacaccgaaggcgaagtgatcgcg
acgtctgatgtgcggccggatacggatgccattcgcttggttttgcccgaatttgttggt
gagatcatgcaggttccaccgaagttctcggcgatcaaggtggccggggaacgtgcctat
gatctcgcccgcgacggcgaagaggttgaactcgaagcccggccgatcgacatgcaccgg
ctggacctcgtggaatgcccggatgtaaaccgcgctgtctttgaagcggaatgcggcaaa
ggcacctatgtccgcgcacttgcccgtgatatcggccgccggctgggcacgcgcggtcat
gtcaccgaactgcgccgcttgctggtcgggccgttcggtgaagaggatctggtcgcgttg
gatgaaatccttcagatggcagaagagcttgaagaaggtgcgggtgtcgatgagctggta
gaagagtttgtcttgccggtgcgcgaggcgatggatgagctggttgaagtcacagtctcg
gatgacgatgcagccaagatcaaaaagggcatggcggtgcttctgcgtggccgggacgcc
ccgctgaactgtgatgtcgcctttgccagccacgcaagtgttcccgtcgccatcggcgcg
atcgagaagggccgctttcagccgagccgggtttttcatctctaa
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