Labrenzia sp. PHM005: FJ695_04545
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Entry
FJ695_04545 CDS
T06152
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03030
DNA replication
labp03410
Base excision repair
labp03420
Nucleotide excision repair
labp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJ695_04545 (polA)
03410 Base excision repair
FJ695_04545 (polA)
03420 Nucleotide excision repair
FJ695_04545 (polA)
03440 Homologous recombination
FJ695_04545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labp03032
]
FJ695_04545 (polA)
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_04545 (polA)
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJ695_04545 (polA)
DNA replication proteins [BR:
labp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FJ695_04545 (polA)
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FJ695_04545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJ695_04545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QDG75190
UniProt:
A0A4Y6RSA1
LinkDB
All DBs
Position
1036151..1039120
Genome browser
AA seq
989 aa
AA seq
DB search
MSTQESSAALTADDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKLLQE
GLTPEEGDEPTHFAVIFDHSAQTFRSDIYPEYKAHRPPPPEDLVPQFGLIREATRAFSTH
CIEQKGYEADDLIATYAAQAAGQGARVTIVSGDKDLMQLIGPTVGMIDTMKNKIFGEPEV
FEKFGVGPDKVIEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLETLLAQAETIKQKK
RRENLIEFADQARISKELVTLKQDVPVETPVGDLSVSDVDGPKAVGFLKAMGFTTLTKKV
AEVTGAELANIEPVDYQVPGWDVPDRKGRMMERPGGAAAADPAESAEGAGGPDGLMVPQT
VADERAAKIGALPVDNSAYETVTTLEQLQPWIDAAYEKGYVAFDTETTSLDAMQAELVGI
SLSSEPGKACYIPLTHKDGEGDLLGGGGLLPGQIPLNEAFKALKPMLEDRGVLKIAQNLK
YDWLVMTRYGVDIGPYDDTMQLSYTVDAGKGGNGMDELSERWLGHKPIPFKEVCGSGKSM
ITFDKVPIDKATAYAAEDADVTLRLWLILKPRLASDHMATVYETLERPMVPVLARMEKRG
ISVDRQMLSRLSGDFAQGAAALEAEIYELAGETFNVGSPKQLGEILFGKMGLPGGKKTKT
GAWSTSAQVLEDLAAEGHALPSKIVEWRQLSKLKSTYTDALPGYIHPETKRVHTSYALAA
TTTGRLSSSEPNLQNIPVRTEAGRKIRQAFIAEKGHKLISADYSQIELRVLAHMADIPQL
KKAFEDGLDIHAMTASEMFGTPIEGMDPMVRRQAKAINFGIIYGISAFGLANQLGIGRGE
ASDYIKTYFERFPGIKEYMEAIKKQVHADGYVTTIFGRKAHYPDVNTKNPNMRNFYERAA
INAPIQGSAADILRRAMVRMEDRLTDAKLNAQMLLQVHDELIFEVPDAEVEATIPLIKDV
MENACDPALKLSVPLQVDARAADNWDEAH
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacaagaatcctccgccgccctcaccgctgatgaccacctgatcctggttgac
ggctccacgtttattttccgcgcctaccatgcgctgccgcccctgacgcgcaaacccgac
ggcttgcccgttggtgcggtttccgggttctgcaacatgctgtggaagctgcttcaggaa
ggtctgacgccggaagaaggcgatgagccgacgcattttgcggtgatttttgatcattcg
gcacagacgttccgctctgatatttacccggagtacaaagcgcatcggccaccgccgccg
gaagatctggtgccgcaattcggcctgatccgcgaagccacccgggccttttcgacccac
tgcatcgaacagaaaggttatgaggccgacgacctgatcgccacctacgcggcccaggcc
gcaggtcaaggggcgcgggtgacgattgtttccggcgacaaggatctgatgcagctgatc
gggccgactgttggcatgatcgacacgatgaaaaacaagattttcggcgagccggaggtt
tttgaaaaattcggcgttggtccagacaaggtcatcgaggttcaatcgcttgccggcgac
agcgtcgacaatgtgcccggtgtgcctggtattggcttgaagaccgccgcgctcctgatc
aatgagttcggcgatctggagaccctgcttgcccaggccgaaaccatcaaacaaaagaaa
cgccgggagaacctgatcgaatttgccgatcaggcgcggatttccaaagagctggtgact
ctgaaacaggatgtgccggtggaaacaccggttggcgatctgtcggtcagcgatgtggat
ggccccaaggcggtcggcttcctgaaagccatgggattcaccacgctgaccaaaaaggtt
gccgaagtcaccggcgcggaattggccaacatcgaaccggtcgactaccaggtccccggc
tgggatgtgccggaccgcaagggccggatgatggagcgcccgggcggggcggctgccgct
gaccccgcggagagtgctgaaggtgccggcgggccggacggtttgatggtgccgcaaacc
gttgccgatgagcgcgcggccaagatcggtgcgcttccggtcgacaacagcgcctatgag
accgtcaccacgctggagcagctgcaaccgtggatcgacgcagcctatgagaaggggtat
gtggccttcgacacggaaaccacctcgctcgatgccatgcaggccgaactggtcggcatt
tccttaagttctgaacctggaaaagcctgttacattccgctgacccataaggacggtgag
ggggatctgttgggcggtggcggattgctgccgggtcagatcccgctgaatgaggcgttc
aaggccctgaaaccaatgctggaagaccgcggcgtcctcaaaatcgctcagaacctcaaa
tacgactggctggtgatgacccgctatggtgtcgacatcggcccgtacgacgacacgatg
cagctctcctacactgtcgatgccggcaagggcggcaatggcatggatgagctctccgag
cgctggctcggccacaagccgatcccgttcaaggaggtttgcggttcgggcaagtcgatg
atcaccttcgacaaggtgccgatcgacaaggcaactgcctatgctgccgaagacgccgat
gtcaccttgcgcctgtggttgatcctgaaaccgcgccttgccagcgatcacatggcaacc
gtttatgaaacgctggaacggcccatggtgccggtgctggcgcgcatggaaaagcgcggt
atttccgttgaccggcagatgctctcccgcctctccggtgattttgcgcaaggcgcggcg
gcgctggaagcggaaatctatgagcttgccggcgaaaccttcaatgtcggctctcccaag
cagcttggcgaaatcctcttcggtaaaatgggtttgccgggcggcaagaagaccaagacc
ggcgcctggtcgacgtcggctcaggttctggaagatctggccgccgaaggccatgcattg
ccgtcaaagatcgttgagtggcgccagctttccaagctgaaatccacctatactgatgcc
ctgcccggctatatccatccggaaaccaagcgcgttcacacgtcctatgctttggcggcg
accaccaccggacgtctttcctcatccgagccgaaccttcagaacattcctgtacgcacg
gaagcgggacggaaaatccgccaagcgtttatcgccgaaaagggtcacaagctgatctcg
gccgattacagccagatcgagctgcgtgtgcttgcccatatggcggatattccgcagctg
aaaaaagccttcgaggacgggctcgacattcacgccatgacggcctcggaaatgttcgga
acaccgattgaaggcatggatccgatggtccgccggcaagccaaggcgatcaacttcggc
atcatctacggcatttccgcctttggcttggccaaccagctcggcatcggccggggggaa
gccagcgactacataaaaacctatttcgagcgtttccctggcatcaaggagtatatggaa
gcgatcaagaagcaggttcatgcggacggctatgtcaccacgatctttggccgtaaggcc
cattatccggacgtgaacaccaagaacccgaacatgcgcaacttctatgaacgggcggcg
atcaacgccccgatccagggctcggcggccgatatcctgcgccgcgccatggtgcgcatg
gaagatcggctgaccgacgcaaagctgaatgcacaaatgcttttgcaagtgcacgacgaa
ctgatctttgaggtgccggatgctgaggtcgaggcgaccattccactaatcaaggacgtc
atggagaacgcctgcgatccggctctgaaactctccgtcccgctgcaagtagacgcccgc
gcggccgacaattgggatgaggcgcattag
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