Labrenzia sp. PHM005: FJ695_05135
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Entry
FJ695_05135 CDS
T06152
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00300
Lysine biosynthesis
labp00470
D-Amino acid metabolism
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01120
Microbial metabolism in diverse environments
labp01230
Biosynthesis of amino acids
Module
labp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FJ695_05135 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FJ695_05135 (lysA)
Enzymes [BR:
labp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FJ695_05135 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDG75297
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Position
1146885..1148159
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AA seq
424 aa
AA seq
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MHHFDYKGGALFAEGVAIEDIAREVGTPFYVYSTATLTRHYEVFSSAFADIPSLVCYAMK
ANSNQAVLATLAQLGAGMDVVSEGELRRARAAGVPAEKIVFSGVGKTEAEQAYALEEDIL
CFNVESEPELHQLSRVATQMGKTARVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARE
VYAEAASLPGLKVTGIDMHIGSQITELEPFDNAFARLGELITDLRGQGHAIDHVDLGGGL
GIPYVTDNDPPPHPDAYAEVVKKHVRELDCKVMFEPGRMIAGNAGILVTKVIYVKDGADK
KFVIVDGGMNDLIRPTLYEAYHEVRPVTEPDPDSDRITADIVGPVCETGDFLAQNRDMPK
VNAGEMLAVYSAGAYGAVQSSTYNSRLLVPEVLVNADQFAVIRPRPSFQELLDLDKIPDW
LNNS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcatttcgactataaaggcggcgccctatttgctgaaggcgtggccattgaagat
atcgcccgtgaagttgggacgccgttttatgtctattcaacggcaacattgacccggcac
tacgaggtgttttcctctgcctttgccgatatcccatcgctggtctgttatgcgatgaag
gccaattccaaccaggctgtgcttgcgaccttggcgcagctcggtgccggcatggatgtg
gtctcggaaggcgaattgcgccgtgcacgggcagctggcgtaccggcagaaaagattgtt
ttttccggggttggcaaaaccgaagccgaacaggcttatgcgctggaagaagacatcctg
tgctttaacgtcgaatccgagccggaactgcaccaactctctcgcgtggcaacacaaatg
ggcaagacggcccgggtgtccatgcgcatcaatccggacgtcgacgccaagacccacgcc
aaaatcgcgaccggcaaagccgaaaataaattcggcattccgtggcagcgcgcacgggaa
gtctatgcagaagctgccagcctgcccggactgaaagtgaccggcatcgacatgcatatt
ggttcccaaattaccgagctggagccattcgacaatgcctttgcccggctcggagagctg
atcaccgacttgagaggccagggccacgcgattgatcatgtcgatctcggtggggggctc
ggaattccttatgtcaccgacaatgacccgccaccgcacccggacgcttatgcggaagtg
gtgaaaaagcacgtccgggaacttgattgtaaagtcatgttcgagccgggccgtatgatc
gctggtaacgctgggatcttggtgaccaaggtcatttacgtcaaagacggtgcggacaag
aagttcgtcatcgtcgatggcggcatgaatgatcttatccggccaacactttatgaggcc
tatcacgaagtccgcccagtgacggagcctgacccggattcggatcgaatcacagccgat
atcgtgggtccggtgtgcgaaaccggtgactttttggctcaaaacagggatatgcccaaa
gtaaacgccggagaaatgctggctgtttattccgctggcgcctatggcgctgttcagtcc
agcacttataactcccggcttttggtgccagaagtcctcgtaaatgctgatcaatttgcg
gtaatccggccccggccaagctttcaagaattgctcgatctcgacaaaatcccggattgg
ctcaacaactcgtga
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