Labrenzia sp. PHM005: FJ695_09350
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Entry
FJ695_09350 CDS
T06152
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
labp
Labrenzia sp. PHM005
Pathway
labp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ695_09350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labp02000
]
FJ695_09350
Transporters [BR:
labp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FJ695_09350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDG76052
UniProt:
A0A4Y6RSP0
LinkDB
All DBs
Position
complement(2058640..2060319)
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AA seq
559 aa
AA seq
DB search
MKQNCNDHAGVCRQSKILCCSTGGMIVKTFSTLKSMSLAALLATSVAFPVMAATPADTFV
IARNTADAITLDPAECFEFTGSRIVANLYERLFMFEPDNLTKLVGGIAESYEFAEDGKSI
TVKLRPGLTFHSGNPVTANDVAYSLSRAVKLDKTPAFIIKQIGWTADNVDSAVTAVDDGT
VKIDILADLSPALVLNLLSSSVASIVDMKEVQKHEVDGDMGYAWLKDHSAGSGPYKLKTW
KANELVMLDAFSDYRHGEPAMKRVVIRHVAEPSAQRLLLEKGDVDAAMELTSDQLKGLDG
NADVAAQQYPKGYLMYLATNMDHPVLSKPEVREALNYIVDYKGMTDTILDGQYKIHQSFW
PSGMWAASLDTPYSYNLDKAKALMADAGVEPGTKITIDTLNKSPFKEVAQNVQAALKEVG
IDSEIILSDGKTLWPKYRARKHELIVARWGPDYSDPHSNADAFAHNPDNRFEAKLTGKLT
WRNAWDASGLTELTNQAAAESDPEKREAIYAELQQKVREDSPFTIMFQAIGTFGQRANVD
GFINGVTSDQAYYRTVTKN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaactgcaatgaccatgccggtgtttgccggcaatccaaaatattgtgttgt
tccacagggggaatgatcgtgaaaacattttcaacactgaagagcatgtctctggcagct
cttctggcgacatctgttgcgtttccggtgatggcggcaacgccagccgatactttcgta
atcgcccgtaacaccgcggatgccattactctcgatccggcagaatgctttgaattcacc
ggcagccgtatcgttgcgaacctctacgaacgcctgtttatgttcgagccggacaacctg
accaaactggttggtggtatcgctgaatcctatgagttcgcagaagacggcaagtcgatc
actgtcaaactgcgtccaggtttgacattccactccgggaacccggtgaccgcgaacgat
gtcgcctattcgctgtcacgcgccgtgaagctggacaagaccccggcgttcatcatcaag
cagatcggctggaccgcggacaacgtcgacagtgcagtgactgccgttgacgatggaacg
gtcaaaatcgacatcctggccgatctttctccagcgcttgttctgaaccttttgtcgtca
agcgtggcgtcaatcgtggacatgaaggaagtccagaagcacgaagtcgatggcgacatg
ggttatgcatggctgaaagaccattcggctggctccggcccttacaagctgaaaacctgg
aaagccaatgaactggtgatgctggacgctttcagcgattaccgtcacggcgaaccggca
atgaaacgggttgtcatccgccacgtcgccgaaccgtccgcacagcgcctgctcttggaa
aaaggcgatgtcgacgcagcgatggagctgacatccgaccagcttaagggcttggacggc
aatgcagacgttgcagcacagcagtatccgaaagggtatctgatgtacctggcaaccaac
atggaccatccggttctgtccaaaccggaagtccgtgaagcgctgaactacatcgttgac
tacaaaggcatgaccgacaccattttggacggccagtacaagatccaccagagcttctgg
ccatccggcatgtgggccgcttcgctcgacacgccgtacagctataacctggacaaggcc
aaagcactgatggctgatgccggtgttgagccgggcacaaaaatcaccatcgacacgctc
aacaagtcgccgttcaaggaagtggctcagaacgtccaggctgccttgaaagaagtcggg
atcgattctgaaatcatcctgtctgacggcaagaccttgtggccgaaataccgtgcccgc
aagcatgagctgattgtcgcccgttggggtcccgattactccgatccgcactccaacgct
gacgcttttgcgcacaacccggacaaccgctttgaagccaaactgaccggcaagttgact
tggcggaatgcttgggacgcgtccggtctgaccgagctgaccaaccaggcagctgcggaa
tccgatccggaaaaacgtgaggcgatctacgcggaactgcaacagaaggtgcgcgaagac
tcaccgttcactatcatgttccaggcgattggcaccttcggccagcgcgccaatgttgat
ggtttcatcaacggcgtgacatccgatcaggcctactaccggaccgtgacgaaaaactaa
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