KEGG   Labrenzia sp. PHM005: FJ695_10150
Entry
FJ695_10150       CDS       T06152                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
labp  Labrenzia sp. PHM005
Pathway
labp00010  Glycolysis / Gluconeogenesis
labp00020  Citrate cycle (TCA cycle)
labp00260  Glycine, serine and threonine metabolism
labp00280  Valine, leucine and isoleucine degradation
labp00310  Lysine degradation
labp00380  Tryptophan metabolism
labp00620  Pyruvate metabolism
labp00630  Glyoxylate and dicarboxylate metabolism
labp00640  Propanoate metabolism
labp00670  One carbon pool by folate
labp00785  Lipoic acid metabolism
labp01100  Metabolic pathways
labp01110  Biosynthesis of secondary metabolites
labp01120  Microbial metabolism in diverse environments
labp01200  Carbon metabolism
labp01210  2-Oxocarboxylic acid metabolism
labp01240  Biosynthesis of cofactors
Module
labp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
labp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
labp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
labp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
labp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:labp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FJ695_10150 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FJ695_10150 (lpdA)
   00620 Pyruvate metabolism
    FJ695_10150 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FJ695_10150 (lpdA)
   00640 Propanoate metabolism
    FJ695_10150 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FJ695_10150 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FJ695_10150 (lpdA)
   00310 Lysine degradation
    FJ695_10150 (lpdA)
   00380 Tryptophan metabolism
    FJ695_10150 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FJ695_10150 (lpdA)
   00670 One carbon pool by folate
    FJ695_10150 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:labp04147]
    FJ695_10150 (lpdA)
Enzymes [BR:labp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FJ695_10150 (lpdA)
Exosome [BR:labp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FJ695_10150 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox DAO FAD_binding_3 Pyr_redox_3 HI0933_like GIDA AlaDh_PNT_C NAD_binding_8 UDPG_MGDP_dh_N FAD_oxidored 3HCDH_N FAD_binding_2 NAD_binding_7
Other DBs
NCBI-ProteinID: QDG76204
UniProt: A0A4Y6RUX4
LinkDB
Position
2238117..2239475
AA seq 452 aa
MSDLNCKLLIIGAGPGGYICAIRAGQLGVDTIVVDEGKPGGTCLNVGCIPSKAMIHAADE
FYKMAHAGSGPLGISAGSPTIDLKQTVAWKDGIVERLNTGVAGLMKKAKARFVSGRARFL
DGKTVEVTDNDGTKTIRAEYIVVASGSAPVELPFLPFGGSILSSTDALNLTEVPDSLAVV
GGGYIGLELGTVFAKLGAKVTVVEAEDRILPLYDKALTAPVAKRLKDLGVTVMTGTKAQG
YADGTLSTDKGDIAAEKVLVTVGRRPRTAGIGIEELALTQDGPFVKIDKFCQTSMRGIFA
IGDVTGEPMLAHRAMAQGEMVAERIAGHSVEWDKRAIPAVCFTDPEVVTCGALPGELEGT
KFAEFPFMANGRAMTTEREDGFIRVVWREADHAVVGIQAVGAGISEMSAAFSLAIEMGAC
LEDIASTIHAHPTQSEGLQEACLRALGHALHI
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtcagatttgaattgcaaacttcttatcatcggcgctggccctggcggttacatttgt
gcgatccgggcagggcagctcggcgtcgacacgattgtcgtggatgaaggcaaacccggc
ggaacctgcctcaatgtcggctgtattccctcaaaagcgatgatccacgcggcagatgaa
ttctacaagatggcccatgccggttccggaccactcgggatttccgccggtagcccaacc
atcgatctgaagcagacggtcgcctggaaagacggcatcgttgaacgcctgaacacaggt
gttgctggcttgatgaaaaaggccaaggcgcggttcgtttctggccgggcccgtttcctt
gatggcaaaaccgttgaagtgaccgacaacgacggcactaagacaatccgcgccgaatat
atcgtcgttgcgtccggttctgctccggtcgagctgccgttcctgccgtttggcggttca
atattatcgtcgaccgatgcgctcaacttgactgaagtgccggacagcctggctgtcgtt
ggtggcggctatatcggacttgagctgggtactgtctttgccaaactcggcgccaaggtc
acagtggttgaagcagaagatcgtatccttccgctctacgacaaagcattgacggctccc
gttgcgaagcggctgaaagatctcggcgtcactgtgatgaccgggacaaaggcgcaaggc
tatgcggatggaacgctgagcaccgacaagggtgatattgccgctgaaaaagtgctggtc
actgttggtcggcgtccgcgcaccgccgggattgggattgaagagctggccctcacccag
gacgggcctttcgtgaagatcgacaagttctgccagacgtctatgcgcgggatttttgcc
attggcgacgtcacgggcgaaccgatgctggcccaccgggcgatggctcagggtgaaatg
gttgccgagcgtattgccggacattccgtggagtgggacaagcgggccattccggctgtt
tgtttcactgatccggaagtcgtgacatgtggcgcgctgccaggtgagcttgaaggcacc
aagtttgccgagttcccgttcatggccaatggccgtgccatgacaacggaacgcgaggac
ggattcatccgcgttgtctggcgggaggcggatcatgccgtcgttggcatccaggctgtc
ggcgcaggtatttcagaaatgtcggctgcgttttcgctggcgattgagatgggtgcctgc
ctggaagacattgcatccacgatccatgcccatccgacccagtcggaaggcctgcaggaa
gcctgtttgcgcgcgctgggacacgcgctgcatatctag

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