Labrenzia sp. PHM005: FJ695_10150
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Entry
FJ695_10150 CDS
T06152
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00010
Glycolysis / Gluconeogenesis
labp00020
Citrate cycle (TCA cycle)
labp00260
Glycine, serine and threonine metabolism
labp00280
Valine, leucine and isoleucine degradation
labp00310
Lysine degradation
labp00380
Tryptophan metabolism
labp00620
Pyruvate metabolism
labp00630
Glyoxylate and dicarboxylate metabolism
labp00640
Propanoate metabolism
labp00670
One carbon pool by folate
labp00785
Lipoic acid metabolism
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01120
Microbial metabolism in diverse environments
labp01200
Carbon metabolism
labp01210
2-Oxocarboxylic acid metabolism
labp01240
Biosynthesis of cofactors
Module
labp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
labp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
labp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
labp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
labp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FJ695_10150 (lpdA)
00020 Citrate cycle (TCA cycle)
FJ695_10150 (lpdA)
00620 Pyruvate metabolism
FJ695_10150 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FJ695_10150 (lpdA)
00640 Propanoate metabolism
FJ695_10150 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FJ695_10150 (lpdA)
00280 Valine, leucine and isoleucine degradation
FJ695_10150 (lpdA)
00310 Lysine degradation
FJ695_10150 (lpdA)
00380 Tryptophan metabolism
FJ695_10150 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FJ695_10150 (lpdA)
00670 One carbon pool by folate
FJ695_10150 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labp04147
]
FJ695_10150 (lpdA)
Enzymes [BR:
labp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FJ695_10150 (lpdA)
Exosome [BR:
labp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FJ695_10150 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
DAO
FAD_binding_3
Pyr_redox_3
HI0933_like
GIDA
AlaDh_PNT_C
NAD_binding_8
UDPG_MGDP_dh_N
FAD_oxidored
3HCDH_N
FAD_binding_2
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QDG76204
UniProt:
A0A4Y6RUX4
LinkDB
All DBs
Position
2238117..2239475
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AA seq
452 aa
AA seq
DB search
MSDLNCKLLIIGAGPGGYICAIRAGQLGVDTIVVDEGKPGGTCLNVGCIPSKAMIHAADE
FYKMAHAGSGPLGISAGSPTIDLKQTVAWKDGIVERLNTGVAGLMKKAKARFVSGRARFL
DGKTVEVTDNDGTKTIRAEYIVVASGSAPVELPFLPFGGSILSSTDALNLTEVPDSLAVV
GGGYIGLELGTVFAKLGAKVTVVEAEDRILPLYDKALTAPVAKRLKDLGVTVMTGTKAQG
YADGTLSTDKGDIAAEKVLVTVGRRPRTAGIGIEELALTQDGPFVKIDKFCQTSMRGIFA
IGDVTGEPMLAHRAMAQGEMVAERIAGHSVEWDKRAIPAVCFTDPEVVTCGALPGELEGT
KFAEFPFMANGRAMTTEREDGFIRVVWREADHAVVGIQAVGAGISEMSAAFSLAIEMGAC
LEDIASTIHAHPTQSEGLQEACLRALGHALHI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttgaattgcaaacttcttatcatcggcgctggccctggcggttacatttgt
gcgatccgggcagggcagctcggcgtcgacacgattgtcgtggatgaaggcaaacccggc
ggaacctgcctcaatgtcggctgtattccctcaaaagcgatgatccacgcggcagatgaa
ttctacaagatggcccatgccggttccggaccactcgggatttccgccggtagcccaacc
atcgatctgaagcagacggtcgcctggaaagacggcatcgttgaacgcctgaacacaggt
gttgctggcttgatgaaaaaggccaaggcgcggttcgtttctggccgggcccgtttcctt
gatggcaaaaccgttgaagtgaccgacaacgacggcactaagacaatccgcgccgaatat
atcgtcgttgcgtccggttctgctccggtcgagctgccgttcctgccgtttggcggttca
atattatcgtcgaccgatgcgctcaacttgactgaagtgccggacagcctggctgtcgtt
ggtggcggctatatcggacttgagctgggtactgtctttgccaaactcggcgccaaggtc
acagtggttgaagcagaagatcgtatccttccgctctacgacaaagcattgacggctccc
gttgcgaagcggctgaaagatctcggcgtcactgtgatgaccgggacaaaggcgcaaggc
tatgcggatggaacgctgagcaccgacaagggtgatattgccgctgaaaaagtgctggtc
actgttggtcggcgtccgcgcaccgccgggattgggattgaagagctggccctcacccag
gacgggcctttcgtgaagatcgacaagttctgccagacgtctatgcgcgggatttttgcc
attggcgacgtcacgggcgaaccgatgctggcccaccgggcgatggctcagggtgaaatg
gttgccgagcgtattgccggacattccgtggagtgggacaagcgggccattccggctgtt
tgtttcactgatccggaagtcgtgacatgtggcgcgctgccaggtgagcttgaaggcacc
aagtttgccgagttcccgttcatggccaatggccgtgccatgacaacggaacgcgaggac
ggattcatccgcgttgtctggcgggaggcggatcatgccgtcgttggcatccaggctgtc
ggcgcaggtatttcagaaatgtcggctgcgttttcgctggcgattgagatgggtgcctgc
ctggaagacattgcatccacgatccatgcccatccgacccagtcggaaggcctgcaggaa
gcctgtttgcgcgcgctgggacacgcgctgcatatctag
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