Labrenzia sp. PHM005: FJ695_10425
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Entry
FJ695_10425 CDS
T06152
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00260
Glycine, serine and threonine metabolism
labp00630
Glyoxylate and dicarboxylate metabolism
labp00670
One carbon pool by folate
labp00785
Lipoic acid metabolism
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01200
Carbon metabolism
Module
labp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FJ695_10425 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FJ695_10425 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FJ695_10425 (gcvP)
00670 One carbon pool by folate
FJ695_10425 (gcvP)
Enzymes [BR:
labp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
FJ695_10425 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
SSSPR-51
Motif
Other DBs
NCBI-ProteinID:
QDG76254
UniProt:
A0A4Y6RV28
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Position
complement(2307878..2310733)
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AA seq
951 aa
AA seq
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MPFELTTYQAYDFANRRHIGPSPAEMEEMLKVVGFASLDDLIDATVPPSIRQKQPLDWGG
PGLSERDALFHMKEVAGKNKVLTSLIGQGYYGTTTPAPILRNILENPAWYTAYTPYQPEI
SQGRLEALLNFQTMVSDLTGLDIANASLLDESTAAAEAMTMAKRSAKSKSNTFFIDENCH
PQNIAVIKTRAEPLGIEIQVGNPDELDPATVFGAIFQYPGTYGHVRDFTEIIAQLHENKA
LAIVAADPLALALLKSPGEMGADIAVGSTQRFGVPMGFGGPHAAYMSCKDAFKRSMPGRI
IGVSIDSRGKKAYRLSLQTREQHIRREKANSNVCTAQALLAVIASMYAVYHGPDGIKAIA
QSVHRKTSRLAKGLEALGFEVKPDVFFDTITVEVGALQGVILNAAVDNGINLRKVGDNKV
GISLDEQTRPETIEAVWRAFGGTMQDDSEANREYRLPQHALRESEYLTHPIFHLNRAEAE
ITRYMRRLADRDLALDRAMIPLGSCTMKLNATIEMIPVTWPEFSDMHPFVPADQAAGYHE
MIADLNEKLCDITGYDAISQQPNSGAQGEYAGLLTIRNYHDARGEAHRNICLIPTSAHGT
NPASAQMVGYKVVPVKADEDGNIDLADFREKAEKHSADLAGCMITYPSTHGVFEETVQEV
CQITHDHGGQVYIDGANMNAMVGLVKPGDIGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
SHLEAYLPGHPEYGSSVGPVSAAPFGSPSILPVSWAYILLMGGEGLTQATKVAILNANYI
AARLEQGYDILYKSETGRVAHECILDTRPLADSAGVTVEDIAKRLMDSGFHAPTMSWPVA
GTLMVEPTESEPKAELDRFCEAMLSIRAEAQDIIDGKIDPENNPLKRAPHTVADLVGEWD
RPYSRKQACYPAGSFDVDKYWSPVNRVDNAYGDRNLVCTCPPMSDYAEAAE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgaactcaccacgtatcaagcttacgactttgccaaccgcaggcacatcggc
ccttctcccgccgaaatggaggaaatgctgaaggttgtcggctttgcctctctcgacgat
cttatcgatgcgacagtgccaccgtccatacgccagaaacagccgctggattggggggga
cctggcctttcggaacgtgatgccctcttccacatgaaagaagttgctggcaagaacaag
gtgctgacgtcactcatcggtcaaggctattacggcacaacgacacctgccccgattttg
cgcaacattctggaaaatccggcgtggtacacagcctacacgccttatcagccggaaatc
tcccaaggccgcctcgaagctcttttgaacttccagaccatggtgtctgaccttaccggt
ctcgacattgccaacgcatctctgctggatgaatcaacagcggccgcggaagccatgaca
atggccaaacgctctgcaaagtcgaagtccaacacgtttttcattgatgaaaactgtcat
ccgcagaacattgcggtcattaaaacccgcgcagagcctttaggcatcgaaatccaggtt
ggcaaccccgatgagctagatccagcaaccgttttcggagccatcttccagtatcctgga
acttacggtcatgttcgtgatttcactgagatcatcgcgcaactgcacgaaaacaaggca
cttgccattgtcgcagccgacccgcttgctttggcgctgttgaaatcaccgggtgaaatg
ggtgccgacatcgctgttgggtccacacagcgctttggcgttccaatgggctttggtggt
cctcacgctgcttacatgtcttgcaaggatgcgttcaaacgcagcatgccaggccgtatc
attggtgtctctatcgacagtcgcggcaagaaggcctaccgcctttccctgcagacccgc
gagcaacatatccgccgagagaaagccaattccaacgtctgtacagcgcaggcgcttctg
gcagtcatcgcgtccatgtacgcggtttatcatggcccggacggcatcaaggcgatcgct
cagtccgttcaccgcaagacctcccgcctggcaaaaggccttgaagctctcggtttcgaa
gtcaaaccggatgtcttcttcgacacaatcaccgttgaagtcggcgcattgcaaggtgtg
attctcaacgctgccgtcgacaacggcatcaacttgcgtaaagttggcgacaacaaagtc
ggcatttcactcgacgagcagacccgcccggaaaccatcgaagccgtttggcgtgcgttc
ggcggcaccatgcaggacgacagtgaggcaaaccgggaataccggctgccgcaacatgct
ctgcgcgaaagtgaatacctcacgcacccgattttccacttgaaccgggcagaagcggaa
atcacccgctacatgcgccgccttgcagaccgtgatctggcacttgaccgtgcaatgatc
ccgctcggctcctgcacgatgaaactcaacgcgacgatcgaaatgatcccagtcacatgg
cccgaattctcggacatgcatccgttcgtcccagctgatcaggctgccggctatcatgag
atgatcgcagacctgaacgaaaagctatgtgacatcactggctatgacgccatcagccaa
cagccaaactcaggcgcacaaggggaatacgcgggtctcctgaccattcgcaactaccat
gatgcacgcggcgaagcacaccggaacatctgcctgattccgacgtcagcacacggaacc
aacccggcctctgctcaaatggttggttacaaggtcgtgccggtcaaggctgacgaagac
ggcaacattgatctggctgacttccgggaaaaggcagagaaacactctgcggatcttgct
ggctgcatgatcacctatccttcgacacacggcgtgtttgaggaaaccgttcaggaagtc
tgccagattacccatgatcatggtggtcaggtctatattgacggcgccaacatgaacgcc
atggtcggcctggtgaagcctggcgacatcggcggcgatgtcagccacttgaacctgcac
aaaacgttctgcattccgcatggcggtggcggtcctggcatggggccgatcggtgtcaaa
tcccatctggaagcctatctccccggccacccggaatatggcagctcggtggggcccgtc
tccgcggcgcctttcgggtcaccatcaattctgccggtcagctgggcctacatcttactg
atgggtggcgagggtctgactcaggcaacaaaggtggcaattctgaacgccaactacatc
gcggcacgtctggagcagggctacgatattctctacaagtccgaaacaggacgtgtggcg
catgaatgtatccttgataccagacctcttgcggacagcgccggtgtcacggttgaagac
attgctaaacgcttgatggacagcggtttccatgccccgaccatgtcatggccggttgcc
ggaactttgatggtcgagccgacagagtcagaaccaaaggccgaactcgaccgcttctgt
gaggcaatgctgtccatccgtgccgaagctcaggacatcatcgatggcaagatcgatccg
gaaaacaatcctctgaagcgggcgccacacacggtggcagacctcgttggtgaatgggat
cgcccctatagccgaaaacaggcgtgttatcctgcaggatcgtttgatgtcgacaagtac
tggtcaccagtcaatcgcgtcgacaacgcatacggcgaccggaacttggtctgcacctgc
ccgccaatgtcggactacgcggaagcagctgaataa
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