KEGG   Labrenzia sp. PHM005: FJ695_10450
Entry
FJ695_10450       CDS       T06152                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
labp  Labrenzia sp. PHM005
Pathway
labp00010  Glycolysis / Gluconeogenesis
labp00020  Citrate cycle (TCA cycle)
labp00260  Glycine, serine and threonine metabolism
labp00280  Valine, leucine and isoleucine degradation
labp00310  Lysine degradation
labp00380  Tryptophan metabolism
labp00620  Pyruvate metabolism
labp00630  Glyoxylate and dicarboxylate metabolism
labp00640  Propanoate metabolism
labp00670  One carbon pool by folate
labp00785  Lipoic acid metabolism
labp01100  Metabolic pathways
labp01110  Biosynthesis of secondary metabolites
labp01120  Microbial metabolism in diverse environments
labp01200  Carbon metabolism
labp01210  2-Oxocarboxylic acid metabolism
labp01240  Biosynthesis of cofactors
Module
labp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
labp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
labp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
labp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
labp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:labp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FJ695_10450 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FJ695_10450 (lpdA)
   00620 Pyruvate metabolism
    FJ695_10450 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FJ695_10450 (lpdA)
   00640 Propanoate metabolism
    FJ695_10450 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FJ695_10450 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FJ695_10450 (lpdA)
   00310 Lysine degradation
    FJ695_10450 (lpdA)
   00380 Tryptophan metabolism
    FJ695_10450 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FJ695_10450 (lpdA)
   00670 One carbon pool by folate
    FJ695_10450 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:labp04147]
    FJ695_10450 (lpdA)
Enzymes [BR:labp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FJ695_10450 (lpdA)
Exosome [BR:labp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FJ695_10450 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like GIDA NAD_binding_8 AlaDh_PNT_C Thi4 Lycopene_cycl DAO Amino_oxidase 3HCDH_N FAD_binding_3 TRAM_2 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QDG76259
UniProt: A0A4Y6RTN0
LinkDB
Position
complement(2314340..2315734)
AA seq 464 aa
MSNFDLVVIGGGPGGYVAAIRAAQLGLKVACVEGRGSLGGTCLNVGCIPSKALLTSSAKF
AELKHLAVHGISTGEASLDIAAMMGRKDKIVGDLTKGISFLFKKNGVESIEGWASIPAPG
QVLVKNGAGETVLTAKNILIATGSEPTPLPGIDFDETNILSSTGALTLSEVPDHLVVIGA
GVIGLELGQVWSRLGAKVTVVEYLDRILPGMDSDIAKLAQRALTKRGLKFQLGRKLTGIE
QTPTGLVLNLERIGKDTTEVLEADKVLIAVGRRPVTRGLGAEALGIKRNDRGFISVDDRF
MTSVPGIYAIGDCVPGPMLAHKAEEDGVACVEMLAGQPSHIDYNAVPAVVYTDPEVASVG
ATEDDLKTAGTEYISGKFSFMANSRARSSGETDGAVKILATPEGKLLGAHICGAHGGDLI
AELVLALTKGASVEDISRTCHAHPALGEAVKEACLDVLGRAIHA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgagcaactttgatctcgttgttatcggcggcggccccggaggatacgtggccgcaatt
cgggcagctcagcttggactgaaggtcgcttgcgtggaaggccgtggttcacttggcgga
acctgcctgaacgttggctgcattccctccaaagcgctgctgacctcttctgccaaattt
gcggagctgaaacatcttgcggtccatgggatcagcacaggcgaagcaagcctggacatc
gccgcaatgatgggccgcaaggataaaatcgttggagacctgaccaaaggcatatccttt
ctttttaagaaaaacggcgtggaatcgattgagggctgggcctccattcctgcaccgggt
caggttttggtgaaaaacggtgccggcgaaacagtactaaccgcaaagaacatcctcatc
gcgaccggatctgagccgacaccgcttccaggcatcgactttgacgagactaacattttg
agcagcaccggtgcgctcacgctttctgaagtgccggatcatcttgttgtcattggggct
ggcgtgatcggcctcgaactcgggcaagtctggtcccggcttggggcgaaggtgaccgtt
gtggaatacctcgaccgcattcttcccggaatggacagcgacattgccaaattggcgcaa
cgggcactgactaaaagaggtctcaaatttcagcttggccgcaagttgaccggaattgaa
caaacaccaactggtcttgtcctgaaccttgaacggatcggcaaggacacaaccgaagtc
cttgaagctgacaaagtgctcatagccgtcgggcgtcggccagtgacacgaggccttggc
gcggaagcgctcggcatcaaacgaaacgaccgcggcttcatctctgtcgatgaccggttc
atgacttccgttccaggcatctacgccatcggcgattgcgttcccggtccaatgcttgcc
cataaggccgaagaagatggcgtggcatgtgttgagatgctggcgggtcaacctagccac
attgactacaacgccgttcctgccgtggtttacaccgacccagaagtcgcttcagtcgga
gcgaccgaagacgacctgaaaactgccggcacagagtacatcagtggcaagttcagtttc
atggcaaacagccgcgcccgttccagtggtgaaaccgacggcgcggttaaaattctggcg
acaccagagggaaagctactcggcgctcacatatgcggtgcccatggtggagacctgatt
gcagaactggttctggcgctgaccaagggcgcgagtgtcgaagacatcagtcgaacctgc
catgcccatccagccctcggcgaagcagttaaggaagcctgccttgacgtgcttggccgc
gcaatacacgcttaa

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