Labrenzia sp. PHM005: FJ695_12325
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Entry
FJ695_12325 CDS
T06152
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03030
DNA replication
labp03430
Mismatch repair
labp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJ695_12325
03430 Mismatch repair
FJ695_12325
03440 Homologous recombination
FJ695_12325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labp03032
]
FJ695_12325
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_12325
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJ695_12325
DNA replication proteins [BR:
labp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJ695_12325
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJ695_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
PAS
Motif
Other DBs
NCBI-ProteinID:
QDG79592
UniProt:
A0A4Y6S2I7
LinkDB
All DBs
Position
2741101..2742513
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AA seq
470 aa
AA seq
DB search
MLTTFSLRLRIFLLFLGLTAVTWGAVSLSLYVGFLRTEVTGVGSGFLFAGILANFGTLAV
FALFWLLFDENVAKPIERIAAAMRTRAHAGVEVSVDHHEARYLGDLAPAVSAVTGELSKV
SDGAEDIVAEETARLNAERAHLALLLTEIPVAIVLVSPTHQIMLYDGQAADVLGQVHVPR
LSASIFDYFSEDELRKACEQLTDKRREVEADVHGTRGNLTFKLRLKKLSQASGYMILIDN
TSARIAPDAARPLIYDFDLEVQDSERAFENRPLQEMSFTVFDTETTGLMPNKDEIVQIGA
VRVVNGRIVPGEEVDQLVNPGRPIPLASSKVHGITDEMVTDAPEALDAVEDFHGFARDSV
IVAHNAPFDMAFLHRYGKVLGLDWDHPILDTVLLSAVVFGANEEHTLDAVCLRLGIKIRP
EVRHTALGDAEATAEALCKLLPILASRGYKTFGEVIQETRKHGRLLKDMN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaccttcagcttgcggctgcggatctttctcctgtttttgggactgacagct
gttacctggggtgccgtcagcctttctctttatgttggttttctgcgtaccgaggtaacg
ggcgttggatctggtttcctgtttgcgggtattttggcgaacttcgggacgcttgcggta
ttcgcgctcttctggctgctgtttgacgaaaacgtcgcaaagccgatcgaacgcattgca
gcagccatgcgcacaagagcgcatgccggcgttgaggtttccgtcgaccatcatgaagca
cgttatcttggggacttggcgccagctgtgtccgctgtaacaggggaattgtccaaggtc
tcggacggggctgaggacattgtcgccgaagaaacggcgcggctgaacgcagaacgcgcc
catctggccttgcttttgaccgagattccggtcgcaatcgtcctggtcagcccgacccat
caaatcatgctgtatgacgggcaggccgcggatgtgctcggacaggtgcacgtcccgcga
ctgagcgcttcgatctttgactatttttccgaagatgaattgcggaaggcgtgtgagcag
ctgacagacaagcggcgggaagttgaggcggatgtccatggtactcgcgggaacctgaca
tttaagctgcgcttgaagaagctcagtcaggcgtccggctatatgatcctgatcgacaat
acgagcgcgcgcattgctcccgatgccgctcggccgctgatctatgattttgaccttgag
gtgcaggattcagagcgggcctttgaaaaccggcccctgcaggaaatgtccttcacggtg
tttgatacggaaacaacgggacttatgccgaacaaggacgagatcgtgcaaatcggtgcc
gtccgcgtcgttaatggccggattgtcccgggtgaagaagtggatcagctggtcaatccc
ggccgtcccattccgctggcatccagcaaagtgcacggcatcaccgatgagatggtcacc
gatgcgccggaagccctggatgctgtcgaggactttcacggttttgcccgggattcggtg
attgttgcccataacgcgccattcgacatggccttcctgcaccgctatggcaaagttctt
gggctggattgggatcatccgatccttgatactgtgttgctctctgctgtggtgtttggc
gcgaatgaagagcacacgctggatgcggtgtgtttgaggcttggcattaaaatccgtccc
gaagtccggcatacggcgctgggagatgcggaagcgaccgccgaagccttatgcaagctt
ttgccgatccttgcatcccgcggctacaaaaccttcggtgaggtcattcaggagacccgc
aagcacgggcggctgctgaaagacatgaactga
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