Labrenzia sp. PHM005: FJ695_12560
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Entry
FJ695_12560 CDS
T06152
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
labp03009
]
FJ695_12560 (rsmH)
Enzymes [BR:
labp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
FJ695_12560 (rsmH)
Ribosome biogenesis [BR:
labp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FJ695_12560 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QDG76634
LinkDB
All DBs
Position
2796240..2797280
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AA seq
346 aa
AA seq
DB search
MMALGDKKDVLDAGGPERHVPVLLDEVLEWLAPQPGKVIVDGTFGAGGYSRKLLDAGATV
VGIDRDPDAIAGGQELVKQSEGRLILVPGQFADLETHARDNGFDGVDGVVLDLGVSSMQL
DEADRGFSFLRDGPLDMRMEQAGPSAADVVNELPVRDLIRIIGLLGEEKRATSVAHAIDN
ARKEKPFSRTLELANLIEKVLGRSPKKAQIHPATRTFQALRIYVNGELHQAAKALGAAEQ
ILKPGGRLVLVSFHSLEDRIVKRFFQDRTKTRGGGSRHMPEEEVPPATFENLTRKAVEAR
DTETDANPRARSAKLRAGRRTDAPARELDIHAAGVPRLAAFHGLGG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgctcggcgacaagaaggacgttcttgacgctggcggaccagagcgccacgtg
ccggttctcctcgatgaggttctggaatggcttgctccgcagcctggaaaggtcatcgtc
gacgggacattcggggcaggtggctattcccgcaagcttttggacgctggcgcaacggtg
gtcggtatcgaccgggatccggatgcgatcgctggtggacaggagctggtcaagcaatct
gagggccggctcatcctggtgcctggtcaatttgccgatcttgaaacccatgcccgcgac
aacgggtttgacggcgtagatggcgtcgttctcgatctcggcgtatcgtccatgcagttg
gatgaagctgaccggggtttttctttcctgcgggatgggccgctcgacatgcggatggag
caggcggggccgtcggcggccgatgtcgtcaatgagctgccggtgcgcgacctcatccgg
attatcggtcttttgggcgaggaaaaacgcgccacatctgtcgcgcatgccatagacaat
gcgcgtaaggaaaagccgttttcccgaacgcttgagctcgccaatttgatcgagaaggtg
ctgggccggtcgccgaagaaggctcagatccatccggcaacccggacgtttcaggcgctc
cggatttacgtgaatggcgaattacatcaggcggcaaaggctttaggggcagctgagcag
attttgaagccgggcggtcgccttgttctggtgagcttccattcgctggaagaccggatt
gtcaaaaggttcttccaggatcgcaccaaaacacggggcggtgggtcgcggcatatgccg
gaagaagaagtgccgccggcaacatttgaaaatctgacacgcaaggccgtcgaggcgcga
gatacggagaccgatgccaatccccgtgcacgctcggccaagctgcgcgctgggcgccgc
acagatgctccagcccgcgagctggacattcatgcggccggcgtgccgcgccttgcagca
tttcatgggctagggggctga
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