Labrenzia sp. PHM005: FJ695_12590
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Entry
FJ695_12590 CDS
T06152
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00470
D-Amino acid metabolism
labp00550
Peptidoglycan biosynthesis
labp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FJ695_12590
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FJ695_12590
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
FJ695_12590
Enzymes [BR:
labp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FJ695_12590
Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
Precursor biosynthesis
Amino acid ligase
FJ695_12590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
ADH_zinc_N
UDPG_MGDP_dh_N
TrkA_N
ELFV_dehydrog
KARI_N
Motif
Other DBs
NCBI-ProteinID:
QDG76640
LinkDB
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Position
2803463..2804863
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AA seq
466 aa
AA seq
DB search
MIPITTFAGKTVALFGLGGSGLATAKALNAGGAHVVCFDDSETRVADATSVGLITQDLKT
LDWSSIAALVLAPGVPLTHPVPHWTVELARDAGVEVIGDVELFCRERRKLCPEAPLIAIT
GTNGKSTTTALVTHLLKELGLDVQMGGNIGTPVLELEPPRPGRHYVVECSSYQIDLAPTL
DPTVGIHMNLSPDHLDRHGTLENYGAIKERLVAGAKVAIVGVDDRLSSAIADRLELARKP
VCRIAGERELSDGIYAHHGRLIEAHDGAQTEVALLAGIDSLRGDHNGQNAAAAFACLRAL
EVPGDKIAAAMTSFPGLHHRMEVVARQGRTLFINDSKATNADAAARALSSFDRIYWIAGG
RAKSGGISSLDEYFPKIAKTFLIGEAAEDFAKTLEGRVPFAISGTLAQAVQDAAAEAAED
GAEEIAILLSPACASFDQYANFELRGAAFVDAVRALPGAGNTQEVA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaatcaccacatttgcaggaaaaaccgtcgcgcttttcgggctcggcggttct
ggtcttgcgaccgccaaggctctgaatgccggcggtgcacatgtggtgtgtttcgatgac
agtgagacacgtgttgccgacgcaacatcggtgggcctgattacgcaggacctgaaaaca
ctggactggtctagcattgccgcgttggtgctcgcccccggtgttccgctaacgcatccg
gtgcctcattggaccgtagagttggcgcgcgatgccggtgttgaagtcattggcgatgtt
gaactcttttgccgggagcggcgcaaactttgcccggaagctccgctgatcgcgatcact
gggacgaacggcaagtcgactacaacggcattggtgacccatcttctgaaagagcttggg
cttgatgtgcagatgggcggcaacatcggcacgccggttctggagttggagccgccgcgg
ccgggccgccattacgtggttgagtgttcgtcctatcagatcgaccttgcccccacgctt
gatccgaccgttggcattcatatgaacctgtcgccggatcacttggaccggcatggcacg
ctagaaaactatggggccatcaaggaacggttggtcgctggcgccaaagtggcgattgtc
ggagttgatgacagactatcttccgcgattgccgaccgtttggaactcgcgcgaaagccg
gtgtgccggattgcgggtgagcgggagctaagcgatggtatctatgcccatcatggccga
ttgatcgaagcgcacgacggcgcccagactgaagtggcgttgctcgcaggcatcgacagt
ctgcgcggtgaccacaacggccaaaacgcggctgctgcgtttgcttgtctcagagcactc
gaagttcctggcgataagatcgctgcggccatgaccagttttccaggacttcaccacagg
atggaagttgtcgcccgtcagggccggactttgtttatcaacgacagcaaggccacgaac
gccgacgcagcagcgcgggcgctgtccagttttgatcggatctactggatcgcaggcggg
cgtgccaagtctggcggcatttcttcgctcgacgagtatttcccgaaaatcgcaaaaacc
ttcctgattggggaggcggccgaggattttgccaagaccttggaaggccgggtgcctttt
gccatcagcgggactttggctcaggcggttcaagacgcagcggccgaagctgccgaagat
ggtgctgaggaaatcgcgatattgctgtcgccagcctgtgcgtccttcgatcaatatgcc
aatttcgaattgcggggcgctgcttttgtagatgcggtgcgtgccttgccgggtgctgga
aacactcaggaggtcgcataa
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