Labrenzia sp. PHM005: FJ695_14235
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Entry
FJ695_14235 CDS
T06152
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
labp
Labrenzia sp. PHM005
Pathway
labp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ695_14235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labp03000
]
FJ695_14235
Transcription factors [BR:
labp03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FJ695_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Sigma70_r4
HTH_20
HTH_10
HTH_23
HTH_5
HTH_11
Sigma70_ECF
HTH_24
PadR
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QDG76942
UniProt:
A0A4Y6RV25
LinkDB
All DBs
Position
complement(3169116..3169817)
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AA seq
233 aa
AA seq
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MLDQTELKNKLRAISEANAAHHVLDILESNLRRMGATHILITGLPMPNRPIDNLVQRFRW
PDQRNDGIESTSLSANDSALMLGLGSNRARIWTITAGDMEHSDLMASAGEGSQIVVVPVT
ELYPFQAFVFASGPSLQVSKYDLANLEALSASAFSRLRELGVVSGQRPGALSTRERKVLE
LTAYGKTAGEIADVLDISQRTVHAHLQNASVKLNASNKTHTVVEALRYGQINV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcaaaccgaattgaagaacaaactgagagctatctcagaagcaaatgccgct
caccatgtcctagatattctggagtccaatctccgccgcatgggggcaacgcatattctg
attaccggtttgccaatgccaaatcgtccgatcgacaatttggtccagcgcttccggtgg
cctgatcaacgcaatgacggaattgaaagcacgtcgttgtctgcaaacgacagcgcattg
atgctgggccttggatcaaaccgggcacggatctggacaatcacagctggtgacatggag
cattccgatctcatggcatctgctggtgaaggcagtcagattgttgtggtgccggtaact
gaactttatccgttccaggcttttgtctttgcaagcggcccgtcgcttcaagtcagcaaa
tatgatcttgccaatctggaagctctttctgcctctgcattctcccgcctgcgtgaactt
ggtgtcgtgtccgggcaacgcccgggagctttgtcgacccgcgaacgcaaggttctagag
ttgactgcatatggcaaaactgctggtgaaattgcagacgttctggatatctcccaaagg
actgtccacgcgcacctgcagaatgccagcgtcaagctgaacgcctcgaacaagacgcac
acggttgtcgaggccctgcggtacggtcagattaacgtttga
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