Labrenzia sp. PHM005: FJ695_15145
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Entry
FJ695_15145 CDS
T06152
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FJ695_15145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
labp03021
]
FJ695_15145
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_15145
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FJ695_15145
Transcription machinery [BR:
labp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FJ695_15145
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FJ695_15145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QDG77104
UniProt:
A0A4Y6RXH8
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All DBs
Position
3335605..3336627
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AA seq
340 aa
AA seq
DB search
MTIQKNWQELIKPTKLEIKPGEDPRFLATVVAEPLERGYGLTLGNALRRILLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKQGPGVVTAGDIQ
TVGDVEVLNPELVLCTLDEGSEIRMEFTVNTGKGYHSSDRNRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLTVETDGSVKPDDAVAFAARILQDQLSIFVNFEEPQRE
VAEDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDDLAKRYEDHQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaccattcaaaaaaactggcaagaactgatcaagccgaccaagctcgagatcaagccg
ggtgaagatccgcgcttcttggcaactgttgttgccgagccgcttgagcgtggctatggc
ctgaccttgggcaatgctctgcgccggattctgctgtcttcccttcaaggtgcagcagta
actgcggttcagatcgacggcgttctgcacgagttttcctcgatcccaggcgtgcgtgaa
gatgtcaccgacatcgttctcaacatcaaggaaatcgccatccgtatggaaggtgaaggc
cctaagcgcatggttgtgcgtaagcagggacctggtgttgtgaccgcaggtgacatccag
accgttggcgacgtggaagtgctcaatccagagctggtgctgtgcaccctggatgaaggt
tcagaaatccgcatggagttcactgtcaacacaggcaagggctatcattcgtcagaccgg
aaccgtccggaagacgcgccgattggcttgatccctgtcgacagcctctattctccggtc
aagaaggtctcctacaaggtggaaaacacccgtgaaggccaggttcttgactatgacaag
ctgaccctgactgtcgaaaccgatggttccgtcaaaccggatgatgccgtggctttcgcc
gcacgcattctgcaggatcagctctccatcttcgtcaacttcgaagagccgcagcgtgaa
gtcgccgaggacactgtcccggaactggcgttcaatccggcgcttttgaagaaggtcgac
gaactggaactgtctgtccggtctgcaaactgcctgaagaacgacaatatcgtgtatatt
ggcgatctcattcagaagaccgaagcggaaatgctgcggacgccgaatttcggccgcaag
tcgctcaacgaaatcaaggaagttctcgcccagatgggtctccatctcggtatggaagtt
gccaactggccgccagagaacatcgacgatctcgccaagcgttacgaagatcatcagtat
taa
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