Labrenzia sp. PHM005: FJ695_16675
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Entry
FJ695_16675 CDS
T06152
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
labp
Labrenzia sp. PHM005
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
HTH_7
AAA_2
VpsR
HutF_N
HTH_38
nSTAND3
HTH_30
AAA_22
TIP49
AAA_7
HTH_23
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
QDG77374
UniProt:
A0A4Y6RY88
LinkDB
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Position
complement(3684976..3686523)
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AA seq
515 aa
AA seq
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MISQINQGGTSELKVLIVEDALSLATIYEHQLSRAGMDTLHVETGAEALSRLRKGGISVV
LLDLQLPDMNGFEVLITIREEQLPVTVVVVTSSGSIKTAVEAMQAGAYDFVVKPVAEERL
VTTTRNAMERETLTEVVAEVRKPARSKANHGFIGSSLPMTAVYKMIESVARSNASVFITG
ESGTGKEVCAEAIHRSSPRAKKPFIPLNCAAIPKDLIESEIFGHVKGAFTGATSDREGAA
ARADGGTLFLDEICELELSLQAKLLRFLQSGTVQKVGSDTLSKVDARIVCATNRDPLKEV
EAGRFREDLYYRLHVLPISLPPLRARGADVIELAQHFLTQFAAEEGKQFEGFSVEAEEAL
MAHGWAGNVREMQNTIRNLVVLNEGPIVEAEMLSAMQTRAPTAPPPPSAIPLNVSPSPAV
SAIADNPAPAGWPTITVALGQSFETLERQLIEATITACGGSLPKTARVLQVSPSTLYRKK
EIWAAQDETATDLPDDQGAANADFAIDQMEENAPS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccagatcaatcagggaggaacgtctgagttgaaagttctgattgttgaagat
gctctttcattggcaaccatttatgagcaccagctctcccgggcgggcatggatacactg
catgtcgaaaccggtgcagaagccctctcaagattgcgtaaaggcggcattagcgtcgtc
cttctggatctacaactgccggacatgaatggctttgaggtcctgatcacaatccgggaa
gaacaactcccagtaacggttgtggtcgttaccagttccggctccatcaaaacagccgtc
gaagccatgcaagctggcgcttacgattttgttgtgaagccggttgctgaagaacggctt
gtgaccactacacgaaacgcgatggagcgcgagacgctcaccgaagtggtggcagaagtc
cgcaagccggcccgttccaaagccaaccacggtttcattggctcttctttgcccatgaca
gccgtctacaaaatgattgaaagcgttgcgcgctccaacgcctcagtcttcatcactggg
gaaagcggcaccggcaaagaagtctgtgcggaggcaatccatagatcgagcccgcgggcc
aaaaagcccttcatcccgctcaattgtgctgcaattccgaaggatctgatcgagtccgaa
atatttggtcatgtgaaaggcgcatttaccggcgcaacgtcagaccgtgaaggcgccgcg
gcacgggccgatggcggaaccttgttcctggatgaaatttgcgaactggaactgtcgctt
caagcaaaactcttgcgctttctacaaagcggcactgtgcaaaaagttggcagcgacacc
ctcagcaaagtggacgcccggattgtttgcgcaaccaaccgcgacccgcttaaagaagtt
gaagctggccggttccgggaagacctttattaccgactgcatgttctgccgatcagcctg
cctccactgcgcgcgcgcggcgcagacgtcatcgagctggcccagcactttctaacccag
tttgcggcagaagaaggaaagcagttcgaagggttctccgtagaagcagaagaagcactg
atggcgcatgggtgggccggaaatgttcgtgaaatgcaaaacacgatccgcaatcttgtg
gttctgaacgagggaccgatcgtcgaggcggaaatgctctccgcgatgcaaaccagggcc
ccaaccgctccgcctccaccgtctgcaattcccctaaatgtatcgccttcacccgctgtt
tcagcaatagcggataatccagcgccggccggatggccgaccatcacggttgcacttgga
caatccttcgaaactctggagcgtcaactcatcgaagcaacgatcaccgcctgtggcggc
agtcttccaaaaaccgcaagagttctgcaggtcagcccgtccactctttatcgaaagaag
gagatttgggccgctcaagacgaaacggcaacagatctgcctgatgatcagggagcggct
aacgcggattttgcaatcgatcagatggaagagaacgctccatcttga
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