KEGG   Labrenzia sp. PHM005: FJ695_17145
Entry
FJ695_17145       CDS       T06152                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
labp  Labrenzia sp. PHM005
Pathway
labp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:labp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FJ695_17145 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:labp02044]
    FJ695_17145 (tssH)
Secretion system [BR:labp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FJ695_17145 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 TniB AAA_7 nSTAND3 Sigma54_activat TIP49 AAA_24 Zeta_toxin IstB_IS21 Clp_N NACHT TsaE AAA_18 NBD_SMAX1 Hpr_kinase_C AAA_33 CCDC22_CC
Other DBs
NCBI-ProteinID: QDG77456
UniProt: A0A4Y6RY78
LinkDB
Position
complement(3788078..3790879)
AA seq 933 aa
MSDILVETVANKLTTVSYESLENAMRLTKSSGHRHLEIVHWLYYLLRDENSDLTHILRHF
DIDSSVVDSDLQAAIAKFKINQTELPGMAAPFQEALERAWFEGTLRYGDYKIRSAYVLIA
AMGDKSARRQFLSYSSAFEKLNRDILVKNLDGIAGASAETGARPIDGSGPQAAVAAAPGE
DAAPGSGAGDDALSQFTVDFTARARAEEFDPIVGRDEEIRQVIDVLLRRRQNNPILTGEA
GVGKTAIVEGFAQKIVAGDVPPSLLGTRLCALDLGLLQAGASMKGEFEKRLRAVIDAVHA
SIVPTILFIDEAHTLIGAGGAAGTGDAANLLKPALARGTLRTVAATTWSEYRQHFEKDPA
LTRRFQPVQVDEPDEEKCFAMVRGLLGPMEDHHQVRILDSAVRSAVSLSHRYIPARQLPD
KAVSVLDTASARVNISQAAQPAKLLDLVAKKGFLETEHKALSNDTELGMEHEEQLSALTE
AIEKTEQDIETLRGEWEAERLLVAGIRRLNKALMDLSGGEPAPHPDAAEIADPEHEGPAL
VPIDDIDLDLGIDLADEQAIRDALHDKRAELAKIPEDDRMVYAYVDDEAVASIISDWTGI
PVGRMVQDEMQTILSLTESLNKRVIGQSHGLAMIAKRIETSRAQLGNPDKPIGVFMLCGP
SGVGKTETALALAETLYGGEDSLITINMSEFQEAHSVSGLKGAPPGYVGYGEGGRLTEAV
RRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDGMGRKIDFRNTLILLTSNVGTDLIM
SAASQMLDTPVSDDPEMAATDPNAPDPEKLAESLRPALLDVFPPALLGRIVTIPYYPLSP
SMLGFIINLQLNKIVKRVKQNRGAELSYGEDVVSYIVSLCRDPDSGGRMIDNILTNDLLP
KLSRAFLTAEMNGEELAGVTLKAGDDGIEIDQG
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgagtgatattctggtcgaaacagtagccaacaagctcacaacagtcagttatgagagc
ctggaaaatgccatgcggctgaccaaaagctccggccaccggcacctggagatcgtccat
tggctctattatctgctccgggatgagaattcagatctgacgcacatcttgcgccacttc
gacatcgatagttctgtggtcgacagcgacctccaggccgccattgccaagttcaaaatc
aaccagacggaattaccgggcatggcagcgcctttccaggaagcgttggaacgcgcctgg
tttgaaggcacgctccggtatggcgattataaaatccgctccgcctatgttctgatcgca
gccatgggcgacaaatcggcccggcgccagttcttaagttattccagcgcctttgagaag
ctgaaccgggatatcctggtgaaaaacctggatgggattgctggcgcctccgctgaaacc
ggcgcccggccgatcgatggctccggcccgcaggcggccgtagcagccgctcccggcgaa
gacgcagcccctggaagcggagctggcgatgatgcgctgtcacaattcaccgtcgacttc
acggcccgggcccgggcggaggaatttgatccgatagtcggccgtgacgaagagatccgg
caagtcatcgatgtgttgttgcgccgccgccaaaacaacccaattctgactggggaagcc
ggggtcggcaaaaccgccatcgtcgaagggtttgcgcagaaaattgttgccggtgacgta
cccccatccctgctcgggacacgcctgtgcgcccttgatctcggtcttcttcaggctgga
gcatcgatgaagggagagtttgaaaaacgcctgcgcgcggtcatcgatgccgttcatgcc
tctatcgtgccaacgattttgttcatcgatgaagcccataccttgatcggcgctggtggt
gccgccggcaccggcgatgccgccaacctattaaaaccggccttagctcgaggaactctg
cgcacagttgcggcaacaacctggtccgaataccggcagcattttgaaaaagacccggcc
ctcacccgccgcttccagccggttcaagtcgatgaaccggatgaagagaaatgctttgcc
atggtgcgcggccttctcggccccatggaagaccatcaccaagtccgtatcctggacagc
gccgtgcggtcagcggtttccctgtcgcaccgctatattccggcccgccagctccctgac
aaagcggtcagcgttctggatacagcctcggcccgggtcaatatctcgcaagctgctcag
ccagctaaactcctcgacctcgtcgccaagaagggctttctggaaaccgaacacaaagca
ctcagcaacgataccgaacttggtatggagcacgaggagcaactgagtgcgctgaccgag
gccattgaaaagacggagcaggacatcgagacgctccgcggtgaatgggaagccgaacgt
ctcttggttgccggcatccggcgcctcaataaagcgctgatggacctaagcggcggcgaa
cctgcgccccatccggatgctgccgaaattgcagatcctgagcacgaaggcccggctctc
gtcccaattgatgacatagatctggatctcggcatcgatcttgccgacgaacaagcaatc
cgcgacgctcttcatgacaaacgggcggaactcgccaaaatcccggaagacgatcgcatg
gtctatgcctatgtcgatgacgaggcggttgccagcatcatttccgattggaccggcatt
ccggttggccgcatggtgcaggatgaaatgcagaccatcctgtcgttgaccgaaagcctg
aacaaacgggtgattggccagtctcatggcctcgccatgatcgctaagcggatcgagacc
agccgcgcgcagctcggcaatccggacaagccgattggcgtgttcatgctgtgcggcccg
tcaggcgtcggcaagacggaaacagcattagcactcgctgaaacgctttatggcggcgaa
gacagcttgatcactatcaacatgtccgagttccaggaagcgcattcggtctctggcctc
aaaggtgcgcctcccggctatgttggctatggcgaaggcggcaggctgaccgaggccgtc
cggcgcaaaccctattcggttgtgctcctagatgaagtcgaaaaagcgcatccggacgtg
catgaaatcttcttccaggtgtttgacaaaggctggatggaagacggtatgggccggaag
atagacttccgcaacacactcatcctgctgacgtcgaacgtcggcaccgacctgatcatg
agtgcggccagccagatgctggacacacctgtatccgatgatccggaaatggctgcgacg
gatcccaatgcaccggacccggaaaaactcgccgaaagcttgcgccctgcgctactagat
gttttcccgccagcgctgctcggccggatcgtcacgatcccctattatccgctgtcgccg
tccatgctcggcttcatcatcaacctgcagctcaacaagatcgtcaagcgggtcaaacaa
aaccgcggcgccgagctcagctatggcgaggatgttgtcagctacattgtgtcgctgtgc
cgcgacccggacagcggcgggcgcatgatcgacaacatcctgaccaacgatctcttgccg
aaactgtcccgcgcattcctcaccgcggaaatgaacggcgaggagctggccggtgttacg
ttgaaggccggggatgatgggatcgaaatcgatcagggctga

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