Labrenzia sp. PHM005: FJ695_17975
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Entry
FJ695_17975 CDS
T06152
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03030
DNA replication
labp03430
Mismatch repair
labp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJ695_17975
03430 Mismatch repair
FJ695_17975
03440 Homologous recombination
FJ695_17975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labp03032
]
FJ695_17975
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_17975
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJ695_17975
DNA replication proteins [BR:
labp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJ695_17975
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJ695_17975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
RCF1-5-like_lid
DNAX_ATPase_lid
Motif
Other DBs
NCBI-ProteinID:
QDG77603
UniProt:
A0A4Y6RX03
LinkDB
All DBs
Position
complement(3967394..3968464)
Genome browser
AA seq
356 aa
AA seq
DB search
MARKAEPVETPEVDALPGIPLPHERSRLIGHGQTEQALLDAYRSERLHHAWILGGPKGIG
KATLAFRFAKFVLAHPDRFGSQTAMATDLSIPEDHPVARQIAAGGHPNILHLRRPWDDKG
KRFKADLPVDEVRRTVNFFGTTASARAWRVCIVDAADDMNSSSANALLKILEEPPERCLF
LVLSHAPGRLLPTIRSRCRRLDMVPLSATDIANGLRELSPAGLPDAAGLNEISETADGSL
RAALTLLAGDGLAIAQGTRKLAENASQMDLKALHTLSDLVAARGQSDNWESFQHVAENWL
HGQMRRSLTAGTGIAYRYVSLWEKTQKAISDSDALNLDRKQVVLDFFLNLRKLQQG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgcaaggcagaacccgttgagacgcctgaagttgatgcgctgcccggcattccc
ttgccgcacgaacgcagccggttgattggtcacggccagactgaacaagctttgctagat
gcctatcggtctgagcgcttgcatcacgcctggatccttggcggtccaaaaggcatcggc
aaggcaacacttgccttccggtttgccaaatttgtccttgcccatccagaccggttcggc
agccaaacggcgatggcaacggatctcagtattcccgaagatcaccctgtcgcccggcag
atcgcggccgggggacatcccaacatcttacacctgcgccgcccatgggatgacaaggga
aaacgcttcaaggcggatctccctgtggatgaggtgcgccggacggtcaatttcttcgga
acaacggcgtccgcccgggcttggcgtgtctgtattgttgatgctgcagatgacatgaat
tccagttctgccaatgccttattgaaaatacttgaagaaccacctgaacggtgtttgttc
ctggttctaagccatgctccaggccggcttttgccaacgatccgctcccgctgccggcgc
ctggacatggtgccgctgtccgcaaccgacatcgcaaacggattgcgggaactgtctcct
gccggcctaccggatgctgcaggattaaacgaaatctcagaaacagcggacgggagttta
cgcgccgcgttgacgcttctggccggagatggccttgcgatcgcgcagggcacgcgcaag
cttgcagaaaatgcgtcccaaatggatctgaaagcgctgcataccctgtcggatcttgtc
gcagcgcgcgggcaatccgataactgggagagtttccagcatgttgccgaaaactggctg
cacggtcagatgcgccgctcgcttaccgctggaactgggatcgcctaccgctatgtatcc
ttgtgggagaaaacccaaaaagccatctccgatagcgacgcgctcaacctggatcgaaaa
caggtcgttctcgacttcttcttaaacctaaggaagcttcaacaaggataa
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