Labrenzia sp. PHM005: FJ695_18025
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Entry
FJ695_18025 CDS
T06152
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labp03016
]
FJ695_18025
Enzymes [BR:
labp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FJ695_18025
Transfer RNA biogenesis [BR:
labp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FJ695_18025
Prokaryotic type
FJ695_18025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QDG77610
UniProt:
A0A4Y6RZD9
LinkDB
All DBs
Position
complement(3976202..3977515)
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AA seq
437 aa
AA seq
DB search
MFKVNNSEMRVGTPNKSHLGLVSILAASLLAIGIPFVASAEASEVSPTKAPEHREVYFPN
TEDLDPNEMRVIACGTGMPTTRAAQAAACFLVELGNGDKFVFDAGSGSAERISSLQIPYS
YLDKIFLSHLHGDHFGALGEMFIGGALMGRQVPLRVWGATGQVEELGTKHALEGMEQMYK
WDLAGRIGLVDARGFKLEANEFDYRGENEIVYDDNGVVIRSWPAIHAIDGPVSFSLEWNG
LKFVYGGDTYPNKWFNEYAKDADLAIHECFVAVPDLVAKMRFTPEQALLVGTQVHTAPEA
FGKIMSEIKPRMAVAYHFFKDFDTTGQVNDRIRTTYDGPLSLAEDFMVWNITKDDIRVRM
AVVEEATWAPPLAGKAALPGEDDQKIYSEASGVPVENMTNSDFISSQRWDGVDEALRGVY
KEAEEALGQEFPYPGDQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaagtcaacaattcagaaatgcgtgttggaacaccaaacaagagccaccttggg
ttggtcagtattcttgctgctagtctgcttgcaattggaataccgttcgtcgctagcgcc
gaggcttcggaagtttcaccgacaaaggccccagagcaccgcgaggtctatttcccaaac
accgaggaccttgatccgaacgaaatgcgcgtgattgcctgtggtaccggaatgccaacg
acacgcgcagcccaagcggccgcctgttttctggttgaattgggcaatggcgacaagttc
gtttttgatgctggctcaggcagtgcggagcgcatttcctcgcttcaaatcccctacagc
tacctcgacaagatctttctatcgcacctccacggagatcacttcggcgcgcttggtgag
atgtttatcggcggcgcacttatgggccggcaggtgccactgcgcgtttggggggccacc
ggacaagttgaggaacttggaacaaaacatgctttggaaggcatggagcaaatgtacaag
tgggacctggcagggcgaattggcttagtcgatgcgagggggttcaagcttgaggcaaac
gagtttgactatcggggtgagaacgaaatcgtttacgacgataacggtgtcgtcattcgc
tcctggcctgcgatccacgcgattgacggcccagtcagcttcagtctcgagtggaacgga
ctgaaattcgtttacggcggagatacctatcccaacaagtggttcaatgaatatgccaag
gatgccgatctggcgatccatgaatgttttgttgctgtgcccgacctggtcgcaaaaatg
cgcttcactccggagcaagccctacttgttggaacacaggtccataccgcacctgaagcc
tttggcaaaatcatgtccgagatcaaaccgcggatggcggtcgcatatcatttcttcaag
gatttcgacacaactgggcaggtgaatgatcgcattagaaccacatatgatggcccactc
agtcttgctgaagacttcatggtctggaacatcaccaaggatgatatccgcgtgcgcatg
gcagtcgttgaagaagctacctgggcaccgccgttggccggcaaagcggcgctgcccggt
gaagacgaccagaagatctatagtgaggcttcaggcgttccggtcgaaaacatgaccaac
agcgacttcatttcaagccagcgctgggacggtgtcgatgaagctctgcgcggggtctac
aaggaagctgaagaagctctgggacaggaattcccgtatcctggcgatcaataa
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