Labrenzia sp. PHM005: FJ695_18975
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Entry
FJ695_18975 CDS
T06152
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00010
Glycolysis / Gluconeogenesis
labp00020
Citrate cycle (TCA cycle)
labp00260
Glycine, serine and threonine metabolism
labp00280
Valine, leucine and isoleucine degradation
labp00310
Lysine degradation
labp00380
Tryptophan metabolism
labp00620
Pyruvate metabolism
labp00630
Glyoxylate and dicarboxylate metabolism
labp00640
Propanoate metabolism
labp00670
One carbon pool by folate
labp00785
Lipoic acid metabolism
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01120
Microbial metabolism in diverse environments
labp01200
Carbon metabolism
labp01210
2-Oxocarboxylic acid metabolism
labp01240
Biosynthesis of cofactors
Module
labp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
labp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
labp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
labp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
labp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FJ695_18975 (lpdA)
00020 Citrate cycle (TCA cycle)
FJ695_18975 (lpdA)
00620 Pyruvate metabolism
FJ695_18975 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FJ695_18975 (lpdA)
00640 Propanoate metabolism
FJ695_18975 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FJ695_18975 (lpdA)
00280 Valine, leucine and isoleucine degradation
FJ695_18975 (lpdA)
00310 Lysine degradation
FJ695_18975 (lpdA)
00380 Tryptophan metabolism
FJ695_18975 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FJ695_18975 (lpdA)
00670 One carbon pool by folate
FJ695_18975 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labp04147
]
FJ695_18975 (lpdA)
Enzymes [BR:
labp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FJ695_18975 (lpdA)
Exosome [BR:
labp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FJ695_18975 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
FAD_binding_3
HI0933_like
DAO
NAD_binding_8
GIDA
2-Hacid_dh_C
Lys_Orn_oxgnase
Thi4
AlaDh_PNT_C
3HCDH_N
CDCA
Amino_oxidase
ANAPC4_WD40
DUF1854
Motif
Other DBs
NCBI-ProteinID:
QDG77776
UniProt:
A0A4Y6RZ57
LinkDB
All DBs
Position
complement(4194612..4196060)
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AA seq
482 aa
AA seq
DB search
MADTNYDVIIIGSGPGGYVTAIRAAQLGFKTAIVEREHLGGICLNWGCIPTKALLRSAEM
MDHANHAKSYGLKLEGKMTADVKDVVARSRGVSARLNGGIGFLMKKNKIDVIWGEAKLTK
PGELVVGKPSKPAVQPQHPVPKGVKGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYF
EAMKPDVMPKSMVVMGSGAIGIEFASFYLSMGVEVTVVELMKNVMPVEDEEISKIARKAL
EKRGMRIITEAKVSKVDKAANSITAHVETKDGKIEKITADRLISAVGVQGNIENLGLEAL
GVKTDRGCVVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVVCIEKIAGVPGVHAMDK
GKIPGCTYCTPQVASVGLTEAKAKEAGRDIRVGRYSFNANGKAIALGEDNGMIKTIFDKK
TGELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTLSEMMKESVLDAYGRVL
NA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccaattatgacgtgatcatcatcggctccgggccgggcggttacgtcact
gcaatccgggcagctcagctcggtttcaaaaccgcaatcgtggaacgcgagcacctgggc
ggcatctgcctcaactggggctgcattccgaccaaggcactgctgcgctctgctgaaatg
atggaccacgccaaccacgccaagagctacggcttgaagctggaaggcaagatgaccgca
gacgtcaaggacgtggttgcccgctcgcgcggcgtctctgcgcgtcttaacggcggcatc
ggtttcttgatgaaaaagaacaagatcgatgtgatctggggcgaggccaaactcaccaag
ccgggtgaactggtcgtcggcaagccgtccaaaccagcggttcagccacagcacccggtg
ccaaagggcgtaaaaggtgagggcacttacactgccaaacacatcatcgttgcaaccggt
gcccgcccacgcgcgctgccgggcatcgagccggacggcaaactgatctggacctatttc
gaggccatgaaaccggacgtcatgcctaaatccatggtagtgatggggtctggcgccatc
ggcatcgagttcgcgtctttctacctctccatgggtgtggaagtcaccgtggttgagttg
atgaaaaacgtcatgccggtcgaggatgaggaaatctccaagatcgcccgcaaagcgctg
gaaaagcgcggcatgagaatcatcaccgaagctaaagtgtccaaggtcgacaaagctgca
aactccatcacagcccatgttgaaaccaaggacggcaagatcgaaaagatcacggccgac
cgcctgatttccgctgttggtgtccagggcaacattgaaaatcttggccttgaagcgctt
ggcgttaaaacagaccgcggttgcgttgtcattgatgggtacggaaagaccaacgtgcca
ggtctctatgcgattggcgatgtcgccggtccgccgatgctggctcacaaggctgagcac
gaaggtgttgtttgcattgagaaaatcgcaggcgttccaggtgttcatgccatggacaag
ggtaagatcccgggttgcacctactgtacgccgcaggtggcttccgttggtttgactgaa
gccaaggcgaaggaagctggccgtgacatccgtgtcgggcgctattccttcaacgccaac
ggcaaggcgattgcccttggtgaagacaacggcatgatcaagacgatcttcgacaagaag
accggcgaattgctgggggcccatatggtcggcgcagaagtgaccgaactcattcagggg
tttgttgtcgcgatgaaccttgagacgaccgaagaagagctgatgcacaccatcttcccg
catccgaccctgtcggaaatgatgaaggaaagtgtgctggacgcttatgggcgtgtcctc
aacgcctaa
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