Labrenzia sp. PHM005: FJ695_19370
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Entry
FJ695_19370 CDS
T06152
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00260
Glycine, serine and threonine metabolism
labp00460
Cyanoamino acid metabolism
labp00630
Glyoxylate and dicarboxylate metabolism
labp00670
One carbon pool by folate
labp00680
Methane metabolism
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01120
Microbial metabolism in diverse environments
labp01200
Carbon metabolism
labp01230
Biosynthesis of amino acids
labp01240
Biosynthesis of cofactors
labp04981
Folate transport and metabolism
Module
labp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FJ695_19370
09102 Energy metabolism
00680 Methane metabolism
FJ695_19370
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FJ695_19370
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FJ695_19370
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FJ695_19370
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FJ695_19370
Enzymes [BR:
labp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FJ695_19370
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDG77847
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Position
complement(4287981..4289306)
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AA seq
441 aa
AA seq
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MTALEKRDWVPEACELYIQELAAKTAQASLEDTAARIDDLIAQNREIHERDCFNLNPATN
VMNPKAEAALAAGLGSRPSLGYPGDKYEMGLEAIEEIEVICAELCAGVFEAKYVEIRVGS
GALGNLYAFMATCRPGDAVIVPPASIGGHVTHHEAGCAGLYGLKIYEAPVSVDGYTVDVD
GLRELARTVKPKLITIGGSLNLFPHPVREIREIADEHGAKVLFDAAHQCGIIAGKAWPNP
LTDGAHLMTMSTYKSLGGPPGGLIVTNEADLAEKLDAIAFPGLTANFDAAKSAALAITML
DWQAFGDSYATAMIDLSKQLAADLSAAGLTIFGADKGFTGSHQFAVEAAPFGGGQAASKK
LRQAGFLACGIGLPIDPVPGDMNGLRIGTPELVRWGVNKDHSEKLAGLIARALTTNDLGS
LAQEVKEFRSEFKDLHFIRKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcattggaaaaacgagactgggtgccggaggcatgcgaactctacattcaagaa
ctggcagcaaaaaccgcgcaggcaagtcttgaggacactgcggcccggatcgacgatctg
atcgcgcaaaaccgcgaaatccatgagcgggactgtttcaatctcaatccggccaccaat
gtcatgaaccccaaggccgaggccgcgctcgccgcaggattgggatcgcgcccgtccctt
gggtatccgggcgataaatatgaaatgggcctggaggcgatcgaagaaatcgaagtgatc
tgtgcagaactctgcgccggcgtgtttgaagccaaatacgtcgaaatccgggtcgggtcc
ggcgcgttaggtaacctttatgctttcatggcgacctgccggccgggggatgctgtgatt
gtcccgccggcgtcaattggtggtcacgttacgcatcatgaggcgggatgtgcgggtctc
tatggccttaaaatctacgaggcgccggtgagcgtggatggatacaccgttgatgttgat
ggccttcgggagctcgcacgaacggtaaagccgaaactgatcaccatcggcggcagcctc
aatctgtttcctcatccggttcgcgaaatccgtgagattgcagatgaacacggcgcgaag
gttctgttcgacgccgcccatcaatgcgggatcattgccggcaaagcctggccaaacccg
ctcactgatggcgcgcatctaatgaccatgagcacctacaaaagcctgggcgggcctccg
ggcggcctgattgtcacgaatgaggcagatctggccgagaaactggatgccatcgccttt
ccgggcttgaccgcgaattttgacgctgccaaatctgcagcgctggcgatcaccatgctc
gattggcaagcctttggagattcttacgccacagccatgatcgacctttccaagcagctg
gcggctgacctcagtgcggcggggctcacaatattcggggcggacaagggctttaccggg
tcgcatcagttcgcagttgaagctgcaccatttggcggcgggcaggcagcgtccaaaaag
ctgcgccaggccggatttctggcctgcggaatcgggcttccgattgaccccgtgcctggg
gacatgaacggccttcgcatcggtacgccggaactggtccgctggggagtaaacaaagat
cattcagaaaaacttgccggattgatcgcccgggcgctgaccacgaacgacctcggatcg
ctcgcacaagaggtcaaggagttccggtcagagttcaaggaccttcacttcattcgcaaa
gactag
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