Labrenzia sp. PHM005: FJ695_20715
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Entry
FJ695_20715 CDS
T06152
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
labp01002
]
FJ695_20715
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
FJ695_20715
Peptidases and inhibitors [BR:
labp01002
]
Cysteine peptidases
Family C82
FJ695_20715
Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FJ695_20715
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Docking
DUF6092
Motif
Other DBs
NCBI-ProteinID:
QDG78088
UniProt:
A0A4Y6RY95
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Position
4584588..4586264
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AA seq
558 aa
AA seq
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MRETNIGKRRLRQIVIAALATIGLVAGSAPGLAQSGPAPTPKPQAASVPAPTFLEPQTPI
ARALQAALSPDVSERAIRFYGERAFAPIWFTEDGITENAHLVVAAMAAANDHALNPDNYG
PLRLVDQAAAAQSPDEWAAFELELTKQYIRYATHLSSGRVQPNKVNKALNLFPDRPDPEM
LLEQAVDAVDFSTFLEALAPRSDNYARLKRRLAQYREKAAAGGFTAVPEGEVLKPGMSDP
RVAALRQRLVEEDIQIAAHHSGETYDHGLVEAVKIFQNLHGLADDGVIGKETFARLNIPL
QEKLIQMELNMERRRWMRDDLGSFYVFVNLADQELKVVKEGKTIHTAPVVVGKPYHATPV
FSDQLDYVEINPFWNVPYSIATAEYLPKLKKNAGALSGKNIRVFRDGSEVAATQIAWNNY
SRGNFPFRLRQDPGNSNALGRIKFMFPNKFNIYIHDTPSKSLFSRAERAFSHGCIRVSDP
FALADVLLSHKSASPGHWENIRDTDKRTVVKPGIPIEVHLTYLTAWMNKDGATHFRKDIY
GRDEKLLDALRKAMTENL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagacaaacattggtaaacggcggttacgccagattgttatagctgcgcttgcc
acaatcggcctagtcgcaggctcggcacctggactggcgcaatcggggcctgcgccaacg
cccaaaccgcaagccgcatcagttccggccccaacctttctcgaaccacaaacgcccatt
gcacgcgctcttcaagcagccctctctccggacgtgtccgaacgagcgatacgattttac
ggggaacgggcatttgcgccaatctggttcactgaggacggcatcacggaaaatgctcac
cttgtggtggcggcaatggctgcggccaatgaccatgcgttaaatccggataactatggt
cccctgcgactggtcgatcaggccgctgcggcacagtctccagatgaatgggctgctttt
gagctggaactgaccaaacaatacatccgctatgcgacgcatctctcctccggccgggtc
caacccaataaggtcaacaaggcgctcaatctctttccggaccgcccagacccagagatg
ttgttggaacaagcggttgatgcggtcgacttcagcacgtttttagaggcacttgccccg
cgctcagacaattacgcgcggctgaaacggcgcttggcacaataccgcgaaaaggccgca
gctggaggtttcacagccgttcctgagggtgaagtactaaagccaggtatgagtgacccg
cgcgttgcagcgctccgccagcgtcttgtcgaagaagatattcagatagcggcacaccac
agcggtgaaacttatgaccacggccttgtagaggcggtgaagatctttcagaacttgcac
ggtctggctgacgacggggtcatcggcaaggaaacctttgccaggctgaacatccccttg
caggaaaaactgatccagatggagctcaacatggagcgccgccgctggatgcgcgacgat
ctgggcagcttctatgtctttgtcaatctggctgatcaggaactgaaggtggtcaaggag
ggcaaaacgatccacacagctcctgtggtggtcggcaaaccctatcatgcaacgccggtg
ttttcagatcagcttgactatgtggagattaaccccttttggaatgtgccctattccatt
gcaacggcggagtatttgccaaagctgaaaaagaatgccggcgcgctttcgggcaaaaac
atccgcgtgtttcgggacggcagtgaagtggccgcaacacaaattgcctggaacaactat
tcccgtggaaactttcctttccggctgcgccaggatccgggcaacagcaatgcgctgggc
cgtatcaaattcatgttcccgaacaaatttaacatctacatccacgacacaccgtcaaaa
tcgctcttttcacgagccgaacgggctttcagccacggctgtatccgggtgtctgatccc
tttgcacttgcggatgttctcctttcacataaatcggcgtctccaggacattgggaaaac
attcgggacaccgataaacggaccgttgttaaaccgggtatcccgattgaagttcacctc
acctatctgacggcctggatgaacaaagacggcgcgacccatttccgcaaagatatttat
ggccgcgacgagaaattgctggatgcactccgaaaggccatgactgaaaatctgtga
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