Labrenzia sp. PHM005: FJ695_22190
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Entry
FJ695_22190 CDS
T06152
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labp03000
]
FJ695_22190 (soxR)
Transcription factors [BR:
labp03000
]
Prokaryotic type
Helix-turn-helix
MerR family
FJ695_22190 (soxR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_17
HTH_3
Sigma70_r4_2
HTH_11
HTH_23
HTH_24
HTH_31
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QDG78350
LinkDB
All DBs
Position
complement(4903201..4903668)
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AA seq
155 aa
AA seq
DB search
MKGTDLLSIGELAERTGVSVSAIRFYETKGLVTSVRNKGGQRRFLRADLRRLSFVLVAQE
FGFSITEIAEQLQKLPDGRAPTKSDWTKISRGFRAHLDRKIEGLMALREKLDGCIGCGCL
SMQKCKLYNAGDAASRHGRGPRYLLGDVPDLPDEG
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggcacggatttattgtcaatcggggagctggccgagcggacgggggtgtcggtg
tcggcgatccgcttttacgagacaaaaggcttggtcacctccgtgcgcaacaaaggcggc
cagaggcgctttttgcgtgcagatttaaggcgcctctcctttgtgttggtggcgcaggaa
ttcggattttccatcaccgagattgccgaacaacttcagaaattaccagacggccgagcg
ccgacaaagtcggactggaccaaaatcagtaggggctttagggcgcatcttgatcgaaag
atcgagggattgatggctcttcgggaaaaactggatggctgtattggctgcggttgcctg
tcgatgcagaaatgcaagctctacaacgccggcgatgcggccagccgccacgggcggggc
ccgcgctatcttttgggagatgttcccgatctgccggacgagggctga
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