KEGG   Labrenzia sp. PHM005: FJ695_24695
Entry
FJ695_24695       CDS       T06152                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
labp  Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:labp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:labp03400]
    FJ695_24695
Enzymes [BR:labp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FJ695_24695
    5.6.2.6  RNA 3'-5' helicase
     FJ695_24695
DNA repair and recombination proteins [BR:labp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FJ695_24695
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 AAA_25
Other DBs
NCBI-ProteinID: QDG78807
UniProt: A0A4Y6S2W6
LinkDB
Position
5455472..5457985
AA seq 837 aa
MNRIMDAALLPNRFQSWFASRGWNPRAHQLQLVDHLSAGQSTLLIAPTGAGKTLAGFLPS
LVELETQGKRKPGQAGGIHTLYISPLKALAVDIARNLEAPVSEMGLDIRLETRTGDTPSH
KRQRQKLNPPDILLTTPEQIALLLSDPASAKLFSSLKTVILDELHALVTSKRGDLLALGL
ARLRQLAPEMRTIGLSATVAEPDDLRAYLVGQPLEDKRTLSSLVEVSGGAEPDISILDSE
ERLPWSGHSSRYAIGDIYQLIKQHNVSLLFVNTRSQAEMVFQELWRINDDTLPIALHHGS
LDVGQRRKVEAAMASGQLRAVVATSSLDMGIDWGDIDLVVNIGAPKGASRLAQRIGRANH
RMDEPSKAILIPANRFEVLECQAALAASKKGEQDTPPLRKGALDVLAQHILGLACADPLD
PSQAFDEIRSSETYRWLDWETFEKVLDFVATGGYALKTYEQYAKLRKGKDGLWRIAHPKI
AQQYRLNVGTIVEAPMLKVRLVKSKAAGRRAPIGRGGRLLGEIEEYFIEQLAPGDTFIFG
GEVLRFEGLRENEAYVSRAQTDNPMIPSYMGGKFPLSTYLAESVRTMLATPDSWKDLPGQ
VREWLEIQQDKSLLPSRDGLLVETFPRSNKHYLICYPFEGRLAHQTLGMLLTKRLERMGA
RPMGFVANDYALAIWGLGDLSLLFSSGKIPLNELFDQDILGDDLDAWLAESSLMKRTFRN
CAVIAGLIERRHPGQEKSGRQVTVSTDLIYDVLRSHEPDHILLQATWNDAAEGLLDISRL
GDLLSRIRGRITHTSLEHVSPLAVPVLLEIGKEPVYGEAIESLLEEAASELLLEAME
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgaataggattatggatgccgcgcttcttcccaaccgatttcaaagctggtttgcctca
agaggctggaacccgcgcgcgcaccaattgcagctggtggatcaccttagtgcgggacaa
tcgacacttctgatcgccccgaccggcgccgggaaaaccctcgccggttttttgcccagc
ctggtggaactggaaacacaaggaaaacgtaaaccgggtcaggcgggtggaattcacaca
ctctacatttctccgctcaaggcgctggctgtcgatattgcgcgcaacctcgaagcccct
gtctccgagatgggcctggacattcggctggaaacccggaccggcgacacgccctcccac
aagcgccagcgccaaaagctcaacccgccggatatacttttgaccacgccggagcaaatt
gcgctgctcctgtccgatccagcctcggcgaagctgttttcttcgctgaaaacggtgatc
ctcgatgaactccacgccctggtcacttccaagcgcggcgatctactggcgctcggtctt
gcgcgcttgcgccagctggcgccggagatgcggacaattggcctttcggcgaccgttgca
gagccggatgatttgcgcgcctatctggttggccagccactggaagacaaacgcacgctt
tcctcgctggtagaagtcagcggtggagcggaaccggatatttccattttggattcggag
gaacggctcccctggtccgggcattcctcccggtatgcgattggcgatatctatcagctg
atcaaacagcacaatgtctctctgctttttgtgaacacccgcagccaggccgagatggtg
tttcaggaactttggcggatcaacgacgacacgctgccaattgccctccaccacggttcg
ctggacgtcggccagcggcgcaaggtggaagcggccatggcgtccggacaattgcgcgcg
gtcgtcgccacaagctctctcgacatgggcatcgactggggcgatatcgatctagtggtc
aacatcggcgcgcccaaaggcgccagtcgtctggcccagcggatcggccgcgccaatcac
aggatggacgagccgtccaaagcaatcctgattccggccaaccgctttgaagttctggaa
tgtcaggcggctttggccgcatcgaaaaagggcgagcaggacaccccgcctttgcgcaaa
ggcgcgctggatgtgctcgcccagcatatcttgggccttgcgtgtgccgacccgctggat
ccttcacaagcctttgatgaaatccggtcttcagaaacctaccgctggcttgactgggag
accttcgaaaaggtgctcgattttgttgcaaccggcggctacgcgctcaagacgtatgag
cagtatgccaaacttcgaaaaggcaaggacgggctctggcggatcgcccatccgaagatc
gcacaacaataccgcctaaatgtcggcaccattgtcgaagcgccgatgctgaaggtgcgg
ttggtcaaatcaaaggccgccgggcggcgggcacccataggccgaggcggccggttgctt
ggcgaaatcgaagagtatttcatcgagcaactggcgccaggcgatacgttcatttttggc
ggcgaagtgctgcgttttgagggcttgcgggaaaacgaagcctatgtctcccgcgcccag
accgacaatccgatgatcccgtcctatatgggtggcaagtttccactctccacctatttg
gccgaaagcgtccggaccatgctggcgacacccgacagctggaaagacctgccgggtcag
gtccgtgagtggttggagatccagcaagacaaatctttgctgccaagccgcgacggcctt
ttggtggaaaccttcccgcgatccaacaaacattacctgatctgctatccctttgaaggt
cggctcgcgcaccagaccctcggcatgctgctcaccaaacggctggaacgcatgggcgcc
cgtccgatgggttttgtcgccaatgattatgctctggcgatctggggtcttggcgatctg
tcgctgctgttttcgtccggaaaaatcccgcttaatgaactgtttgaccaggacattctg
ggggacgatctggatgcttggctggcagaatccagtctgatgaaacgaactttccggaac
tgcgcagtcattgccggcctgatcgaacgccgacatccgggacaagagaaatctggccgg
caggtcacggtgtctacggatctgatctacgatgttttacgaagccacgagcccgatcac
atccttttgcaggcaacctggaacgacgccgcggaaggacttttggatatctcgcgattg
ggcgatcttctttccaggatccgcggtcgaatcacgcatactagcctggagcacgtgtct
cctcttgccgtgccggtccttcttgaaattggcaaggaacctgtttacggcgaggcgata
gagtccctattggaggaggccgcgtcggaactgcttctggaggccatggaatga

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