Labrenzia sp. PHM005: FJ695_24745
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Entry
FJ695_24745 CDS
T06152
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00071
Fatty acid degradation
labp00280
Valine, leucine and isoleucine degradation
labp00310
Lysine degradation
labp00362
Benzoate degradation
labp00380
Tryptophan metabolism
labp00410
beta-Alanine metabolism
labp00640
Propanoate metabolism
labp00650
Butanoate metabolism
labp00907
Pinene, camphor and geraniol degradation
labp00930
Caprolactam degradation
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01120
Microbial metabolism in diverse environments
labp01200
Carbon metabolism
labp01212
Fatty acid metabolism
Module
labp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FJ695_24745
00650 Butanoate metabolism
FJ695_24745
09103 Lipid metabolism
00071 Fatty acid degradation
FJ695_24745
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FJ695_24745
00310 Lysine degradation
FJ695_24745
00380 Tryptophan metabolism
FJ695_24745
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FJ695_24745
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FJ695_24745
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FJ695_24745
00930 Caprolactam degradation
FJ695_24745
Enzymes [BR:
labp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FJ695_24745
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FJ695_24745
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FJ695_24745
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
NAD_binding_2
UDPG_MGDP_dh_N
F420_oxidored
Sacchrp_dh_NADP
2-Hacid_dh_C
FAD_binding_3
ApbA
Pyr_redox_2
NAD_Gly3P_dh_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QDG78817
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All DBs
Position
5471122..5473332
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AA seq
736 aa
AA seq
DB search
MTYKNFTIETDEDGIALITWDMPAKSMNVIDLSVMDELDAVVDQVVGDDAIKGAVITSGK
NAFSGGADLTMLEGLLKDFHVQRAKDPEAAAKALFEGSRKLTLVYRKLETCGKPFVAAVN
STSMGGGTELALACHARVADEDLKMGLPEVKVGLFPGAGGTQRVMRMADGQQGMQFLLQG
KTLRAPQAKQLKLIDEVTPPKKLVAAAKKMLKAGVDPVKPWDKKGFKAPNGKVYSPAGFQ
FWPAANAIYRRETFDNYPGARYLLHAVVEGLQLPMDLALQVESRYFAKVLQTPEAANMIR
SLFVSMQELNKGARRPVDQRPNNIKKVGILGAGFMGAGIAYVTAQAGINVVLIDQTQEAA
DKGKAHSDGILSKAVKRGRSTEEQKAKVLSKIEATTDYDALADCDLVIEAVFEDRDIKKV
VTEKAEAVMKSRAIYASNTSTLPITSLAQASKRPKNFIGIHFFSPVDKMMLVEVIMGKKT
SDRALAMALDYIKAIKKTPIVVNDSRGFYTSRVVMTYIREGLMMLADGIPAPMIENAGKM
AGMPVGPLSLGDEVALDLAWKIVSATRKDLGVKYVEGPLDNILEEMVVKRERFGRKNGKG
FYDYNGKDKSLWPGIPDVVGQPKSADSFNIEELKQRLLVMQALESARIFEENCLTDVREA
DVGSILGFGFAPYTGGTLSYIDMMGTAAFVDLCKKFTRKWGPRFKPNKLLREMAKNDETF
YGKFPPKVEVAVKDAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacttataagaacttcacgatcgaaaccgatgaagatggcattgccctgatcacctgg
gacatgccggctaagtcgatgaacgtcatcgacctcagcgtcatggatgaactggacgcc
gttgttgatcaggttgttggcgatgacgccatcaagggcgctgttatcacgtccggcaaa
aacgccttttccggcggagcggacctaaccatgttggaaggcctgctgaaggacttccac
gtgcagcgcgccaaagatccagaagctgctgccaaagcactgtttgaaggctcccgaaag
ctgacgctggtctaccgcaagctggaaacatgcggcaaaccgtttgtcgcggccgtcaac
agcacctccatgggcggcggcaccgaattggctctggcctgtcatgcacgcgttgccgat
gaagacctgaaaatgggccttccggaagtgaaagtcggtcttttcccgggagctggcggc
actcagcgggtcatgcgcatggcagacggccaacagggcatgcagttcctgcttcagggc
aagaccttgcgcgcgccgcaagccaaacagctcaagctgattgatgaggtcaccccgccc
aagaagctggtcgcagctgccaagaaaatgctgaaggccggtgttgatccggtcaaacct
tgggacaagaaggggttcaaggcgccgaacggcaaggtctactcccctgcgggcttccag
ttctggccggcagccaatgcgatctaccgccgcgaaacgttcgacaactacccgggcgcc
cgctatctgctgcatgcggttgtggaaggcctgcagctgccgatggatctcgcccttcag
gtggaaagccgctatttcgcgaaggtcctgcagacccccgaagcggccaacatgatccgc
tcgctgttcgtttcgatgcaggagctgaacaagggcgcccgccgtccggtcgaccagcgc
ccgaacaacatcaagaaagttggtattctcggcgcgggctttatgggcgcaggcattgcc
tatgtcaccgcccaggctggcatcaacgtggtcctgatcgaccagacacaagaagctgcg
gacaagggcaaggctcattctgatggcattttgtccaaggcggtcaagcgtggccggtcg
acggaagagcagaaagccaaggtcctttccaaaatcgaagcaaccacggactatgacgct
cttgccgattgcgacctggtgattgaagcagtcttcgaagaccgcgacatcaaaaaagtg
gtgacggaaaaagccgaggcagtcatgaagtcccgggcgatctacgcctccaacacctca
acgttgccgatcacgtctcttgcccaggcgtccaaacgcccgaaaaacttcatcggcatc
cacttcttctcgccggtcgataagatgatgctggttgaagtgatcatgggtaaaaagaca
tctgatcgcgcactcgccatggcactcgattacattaaggccatcaagaagaccccgatc
gtcgtcaacgacagccgcggcttctacacgtcacgtgtggtcatgacctacatccgcgaa
ggcctgatgatgctggcagacggcattccggcaccgatgatcgaaaatgcaggcaagatg
gccggcatgccggttggaccgctgtcgctcggtgacgaggttgccctcgatctggcctgg
aaaatcgtctcagccacccggaaggaccttggcgtcaaatacgttgaaggtccgctcgac
aacatcctggaagagatggtggtcaagcgggaacgctttggccgcaagaacggcaagggc
ttttacgattacaacggcaaggacaagagcctgtggccgggcattccggacgttgtaggt
cagccgaagtccgcagacagtttcaacatcgaagaactcaagcagcgcttgctcgtcatg
caggccttggaatctgcgcggatctttgaggagaactgtctcacagacgttcgagaagcg
gatgtcggctccattctcggctttggctttgcaccatacactggtggcacgctcagctac
atcgatatgatgggaacggcagcctttgtggatctttgcaagaagttcacccgcaagtgg
ggcccgcgtttcaagccgaacaagctgctgcgtgaaatggccaaaaacgatgagactttc
tacggcaaattcccgccaaaagtcgaagttgcggtcaaagacgccgcctag
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