Labrenzia sp. PHM005: FJ695_25080
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Entry
FJ695_25080 CDS
T06152
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
labp
Labrenzia sp. PHM005
Pathway
labp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FJ695_25080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labp02000
]
FJ695_25080
Transporters [BR:
labp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
FJ695_25080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
HTH_39
Motif
Other DBs
NCBI-ProteinID:
QDG78878
LinkDB
All DBs
Position
complement(5538631..5539770)
Genome browser
AA seq
379 aa
AA seq
DB search
MDNTKRYERLRERYLNGDLDRRKFLGLIGAAGLAYGVQTPFARHAMAATKEVRFDGWGGV
VSEAFRKHAFGPYTDKTGIKVVDGTFGGGDEYLSRVKASQEGEYNIAHLSGVFDYARYTN
LGLNSTLNEDNIPNLKYVIPKLVDVFRNVTDGKLSCVPYDYGTTGIAYNRKHISDAEAKE
KGAKLLIDAAYKGKIGGWSDWRTRVWYASLQTGQDPNNATDMDAVWEAVRTNRDLLLKYW
QSGAELMSLLAEEEIYVTEGWSGRIYALQEQGHDIGYIDPPNGFGWQECLFVIKGSPMEA
CEELLNFMLAPETSIAVAEGQNYPPALDPTKVDLGSKIPTLPAFDPTGTLDGLTFANPEY
WNSNEQAWAKTFGRIQKGY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccaaacgttatgagcgcttgcgcgaacgttatctaaacggcgatctcgac
cgtcgaaagtttttgggtctgatcggcgcagcgggtcttgcctacggtgtgcaaacaccg
tttgcccggcacgccatggcggccaccaaagaggttcgcttcgacggatggggcggtgtc
gtctcagaggccttccgcaaacatgccttcggcccctataccgataagacaggcatcaaa
gtcgtcgacgggacttttggcggcggtgatgaatacctctcccgggtcaaggcgagccag
gaaggggaatacaacattgcccacctgtccggtgtcttcgattatgcgcgctataccaat
ctcgggctgaattcgacgctcaatgaagacaacatcccgaatctcaagtacgtcattccg
aaactggtcgatgtgttccgcaatgtcactgacggcaagctatcgtgcgtcccatatgac
tacggaacaaccggtattgcttataaccgcaaacacatttccgacgccgaagccaaggaa
aaaggcgcgaaacttctcatcgatgcggcttacaagggcaagattggcggttggtccgat
tggcgcacacgtgtctggtatgcatccctacagacaggtcaggatccgaacaatgcgacc
gacatggatgccgtctgggaggctgtgcgcaccaaccgtgacctgcttttgaaatactgg
cagtccggcgctgaactgatgagccttctcgccgaagaagagatctacgtcaccgagggc
tggtccggccgcatctatgcgcttcaagagcaagggcatgatatcggctacatcgatccg
ccgaacggcttcggctggcaggaatgcctgtttgtaatcaaaggctctccaatggaagcc
tgtgaagagctgctgaacttcatgctcgcccctgaaacctcgatcgcggttgccgagggc
caaaattatccgccggccctggacccgaccaaagtggatctgggatctaagatcccgacc
ctaccggccttcgatccaacaggcacattggatggccttaccttcgccaatccggagtat
tggaactccaatgaacaggcttgggccaagaccttcgggcggatccaaaaaggctactaa
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