Labrenzia sp. PHM005: FJ695_25205
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Entry
FJ695_25205 CDS
T06152
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
labp
Labrenzia sp. PHM005
Pathway
labp02020
Two-component system
labp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJ695_25205
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FJ695_25205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
labp02035
]
FJ695_25205
Bacterial motility proteins [BR:
labp02035
]
Flagellar system
Chemotaxis proteins
MCPs
FJ695_25205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
HAMP_2
PAS_8
PAS_9
PAS_4
CHASE3
PRC
PAS_7
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
QDG78899
UniProt:
A0A4Y6S184
LinkDB
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Position
complement(5568919..5572101)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAIKFSDLNISKRLAIGFGAVGLLLPVAVVFSIVQSRSIEHDVGDIANVRAPVTLSSAQL
SEDVRGAVSALRGFILNPNDGTRQQHEVALTGLEHHIEKFHKKADLLSAEEQKQWAELET
TFKEFVSVQGEITQIIGTPAAFPALKMLSEEATPLTDALFSQITAMIDDEQKLSATAERK
ALLKTMADVRGNLANSVANLRLYLISGDPSAKAAFEERWAILENRLETLEDSSGIFSNSQ
SREFAKFAGAYDDFKSVPAELFKLREAPSWNMAAFQVSETLVPLQNQILDFIDGEVGSDG
ERAGGFKQVHAEKLIYEANHAYSALETMIFLMVGLLVVGLIIGVSLAFVIGRSISGPLVR
LSEQISQIADGTLDVTVTDTESGGEIGAMANSLERLRSDLQKADQGARENMRIRVALDNC
TTNVMVADNDYDIVYMNESLNEMMQDAEADLREALPQFDAKKLVGANIDQFHKNPAHQRG
MLETLTSPYETSLTIGNRIFDLIATPVMDDQGNRLGTVVEWTDKTKEVALERESKTAFQD
NMRIRVALDNCSTNVMVADNDFNIVYLNDSVTSMMRNAEADLRKELSQFDVNKLVGSNID
VFHKNPAHQRGMLERLSSTYETSINVAGRIFDLIANPVLDAEGNRLGTVVEWKDVTQERA
VENEINTVVNAVVGGNFEERVPLDGKSGFMLSLAEAMNRLCDTTGSALDDVSVNLGALAE
GDLNSRITKTYSGSFEDLKNKLNDTASRLGEIVTDVVVGANEVTNASAEITTGTNDLSQR
TEQQASNLEETAASMEEIASTIKQNADNAQQANQLAINARGVASDGGEVVGKAVTAMSAI
EDSSQKISDIIGVIDEIAFQTNLLALNAAVEAARAGDAGKGFAVVASEVRSLAQRSSEAA
KDIKQLIIESGSQVKDGVDLVNNAGTSLTEIVDSVKRVTDIVSEIAAASTEQATGVEEIN
KAISQMDEMTQQNSALVEENAAACRMLQEQAEGMHQRMSYFSVDAASTAAAAPVRQTKPK
PVARAMPAARVASGGGGGAVAAMQSDIETAFDADDDWKEF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaagttttcggatttaaacatcagcaagcggcttgcaataggcttcggagcg
gtcgggcttttgttgccagttgctgtcgtgttttcgattgtgcaaagcaggtcgattgaa
cacgatgtcggcgatattgcgaatgttcgagcgccagtcacgctgtcaagcgcccaacta
tctgaggatgttcgaggggcggtttcagcgcttcgcggatttatcctgaatccgaatgat
ggaacacggcaacagcacgaagtcgcgttgaccggccttgagcatcacatcgagaaattc
cataagaaggctgatttgctgtcggctgaagagcaaaagcagtgggctgaacttgaaacc
acctttaaagaattcgtttcagttcagggtgaaattacacagattatcggcactccggcg
gcattcccggcattaaagatgctgagcgaagaagccacgccgcttaccgatgcgctgttt
tctcaaatcactgcgatgattgacgatgagcaaaaactgagcgcaacagcagagcgtaaa
gcgctgctgaagaccatggcggacgttcgaggtaatctcgccaattccgtcgcgaatttg
cggctgtatctgatttctggcgacccgagcgccaaagctgcatttgaggaacgctgggct
attctggagaaccggcttgagacccttgaagatagctccgggatcttcagtaattcccaa
tccagagagtttgcaaagtttgcaggggcctatgacgatttcaaatcggttcctgccgag
ctgttcaaactccgtgaggcgccttcttggaatatggccgctttccaggtgagtgagaca
ctggttcctcttcaaaaccagatattggactttattgacggcgaagtcggcagtgatggc
gagcgtgcaggtggcttcaagcaggttcatgctgaaaagctgatctatgaggcaaatcac
gcctactcagccttggagaccatgatttttctcatggttggcctcttggtcgttggcctg
atcatcggtgtaagtctggcgtttgttatcggccgcagcatttccggtccgcttgttcgt
ttgagtgagcaaatcagtcaaatcgcagatgggacgctggatgtcacagttactgacact
gaaagcggtggcgaaatcggagcgatggccaatagcctcgaacggctccggagcgacctg
cagaaagcagatcagggagcgcgtgagaacatgcgtattcgcgtggcgcttgataattgt
acgaccaacgtgatggtcgcggacaatgactacgacattgtttatatgaacgaatctctc
aatgaaatgatgcaggacgctgaagctgatcttcgtgaagcgctgccgcagtttgatgca
aaaaaactggtgggagccaacattgatcagttccacaaaaacccagcccatcagcgcggg
atgttggaaaccctgacatcgccgtatgagacatcccttacaattggcaaccgtatcttt
gatctgattgcgacaccggtaatggatgatcaggggaaccggctgggaacagttgttgaa
tggaccgacaagaccaaagaagtggcgcttgagcgtgagtctaaaacagccttccaggat
aatatgcggatccgtgttgcactggataactgctctacaaatgtcatggtggcggataac
gacttcaacatcgtctatctgaatgacagcgtaacatcgatgatgcgcaatgcagaggct
gatctgcgcaaggaactgtctcagtttgatgtcaacaaactggttggctccaatattgac
gtcttccacaagaacccggcgcaccaaaggggcatgcttgagcggctttcatccacctat
gaaacgagtatcaacgttgccggccgtatcttcgatctgatcgcaaatccagtcctggac
gcagaaggaaaccgtttgggtacggttgtcgaatggaaggatgtgacacaagagcgtgcg
gttgaaaatgaaatcaacaccgttgtgaatgcggttgttggtggcaacttcgaagaacgg
gtgcctctggacggcaagtccggcttcatgctcagcttggcggaagctatgaaccgcctc
tgcgatacaactggctctgccttggatgatgtcagtgttaacctgggtgcgcttgccgag
ggcgatttgaacagccgcatcaccaagacctacagcggcagctttgaggacctcaagaac
aagctcaatgacacggcttcgcgccttggcgagattgttacggacgtggttgtcggtgcg
aatgaggtaaccaacgcctcggccgagattaccactggtacaaacgatctgtcgcaacgg
acagagcagcaagcgtccaatttggaagagaccgctgcttctatggaagaaattgcatcg
accatcaaacagaacgcggacaatgcacagcaagccaatcaattggcgatcaatgctcgc
ggcgtggcatcggacggcggagaagtcgttggtaaagctgtcacagcaatgtctgcaatc
gaagactcctcccagaagatctccgacatcattggagtgattgacgaaattgccttccag
accaaccttctggcgctgaatgcggccgtggaagcggccagagcaggagacgcaggcaaa
ggatttgcagttgtcgcatccgaagttcggtctctggcgcagcgatcatctgaggccgcg
aaggatatcaagcagctgatcatcgaaagcgggtcgcaggtgaaagatggtgttgatttg
gtcaacaatgcaggcacctcgctgacggagattgtcgactcagtcaaacgggtaaccgat
atcgtctcggaaattgcagcggcaagcactgagcaggcaaccggtgttgaggaaatcaac
aaggccatcagccagatggatgagatgacccagcaaaactcagcccttgttgaagaaaat
gcggccgcgtgccggatgttgcaggagcaggccgaaggtatgcaccagcgtatgtcctac
ttctcggttgatgcggcttcaacagcagcggcagctccggtgcggcagacaaagcctaag
ccggtggcaagggcaatgcctgcagccagggtggcgtctggcggtggcggcggagctgtt
gcggccatgcagtcagatattgaaaccgcctttgacgcggatgacgattggaaagaattc
taa
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