Labrenzia sp. PHM005: FJ695_25395
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Entry
FJ695_25395 CDS
T06152
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00061
Fatty acid biosynthesis
labp00071
Fatty acid degradation
labp01100
Metabolic pathways
labp01212
Fatty acid metabolism
labp02024
Quorum sensing
labp04146
Peroxisome
Module
labp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FJ695_25395
00071 Fatty acid degradation
FJ695_25395
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FJ695_25395
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ695_25395
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
labp01004
]
FJ695_25395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labp04147
]
FJ695_25395
Enzymes [BR:
labp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FJ695_25395
Lipid biosynthesis proteins [BR:
labp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FJ695_25395
Exosome [BR:
labp04147
]
Exosomal proteins
Exosomal proteins of breast milk
FJ695_25395
Exosomal proteins of breast cancer cells
FJ695_25395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3417
Motif
Other DBs
NCBI-ProteinID:
QDG78932
UniProt:
A0A4Y6S0N6
LinkDB
All DBs
Position
complement(5615141..5616841)
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AA seq
566 aa
AA seq
DB search
MTSSERPWTAFYSPDMRPEIEAASYRTISDLIRSASDTFGDTTAFTACMPNGMNGSLTFA
QVDEMSDAFAVYLREVAGLAQGDRVALQMPNGLAFPVAAFGILKAGCVLVNVNPLYTADE
MAKQFQDAEPHALVIIDMFADKIPEATRGHPIPNIIVTRVAEFLPWLPRTLIGLVQKYKD
KTVKPIEVPHTRFPDALAAGRTRRSRENIEVDVYHQSVEPGDTACLQYTGGTTGVAKGAM
LTHENLIMNMEQSLEMIPAIKRGEETILTALPMYHIFAFTLNLLAFYWLGGRNILIPSPR
PISNLKKAFENYKITWLSGVNTLFNALNNEQWFRDNPPKHLKMASAGGMALLADVAKRWE
EITGKPVLQGYGLTETSPVLSFNPLGQVRDGSIGVPIPSTLMRCVDDDGNTVPVGERGEI
AAKGPQVMAGYWNKPEETAKVMRDGWFLTGDIGVMDADGYFSVVDRKKDMILVSGFNVYP
NEVEDCLASHPGIFESAVIGVPDDDTGEAVKAFVILDNSSLTPEEIRAHCKKHLTGYKVP
KIIEYREDLPKSNVGKILRKDLRAEA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaagtgaacgtccgtggacagcgttctatagccctgacatgcggccggagatc
gaggcggcatcttatcggaccatcagtgatttgatccggtccgcctccgatacttttggc
gatacgacagcttttaccgcctgcatgccaaacggcatgaacggatcgctgacattcgcg
caggtcgacgagatgtcggatgcgtttgccgtttacttgcgggaagtggcggggctggcg
caaggcgaccgcgtggcactgcagatgcccaacggactggcctttccggtcgcggccttt
gggatcctcaaggcaggctgtgttttggtgaacgtcaatccgctctacaccgcggatgaa
atggctaaacagtttcaggatgccgagccgcatgcgctggtgatcatcgacatgttcgcc
gacaagatcccggaagcgacccgcggccatccgatccccaatattattgtcacccgcgtg
gctgaattcctgccctggctgccgcggaccctcattggtctggtgcagaaatacaaggac
aagacggttaagccgattgaagttcctcatacccgttttccggatgcgctggccgccggc
cggacccgccggtcacgcgaaaacattgaagtggatgtctaccaccagagcgttgaaccg
ggagacacggcctgtctgcaatataccggcggcacaacgggtgttgccaagggcgcgatg
ctcacccacgaaaatctcattatgaacatggagcagtcgctggagatgatcccggcgatc
aaacgcggcgaagaaaccatccttaccgctttgccgatgtatcatatctttgcgttcaca
ttgaatttgctcgccttctactggctgggcgggcgcaatattttgatccccagtccgcgc
cccatcagcaatttgaaaaaggcgttcgagaactacaaaatcacctggttgagcggtgtg
aatacccttttcaatgcgttgaataacgagcagtggttccgggacaatccgcccaaacat
ctgaaaatggcctcagccggtggaatggctctgctggcggacgttgcaaaacgctgggaa
gaaatcaccggaaaaccagtgctgcagggatatggcctcacagaaacctctcctgtgctc
agtttcaaccccctgggccaggtaagggatgggtccatcggagtgcccattccctcaacg
ctgatgcgctgtgtcgatgatgatggcaacacagtcccggttggtgagcgcggcgaaatc
gcggcgaaagggccgcaagtcatggcggggtactggaataagcccgaagagacagccaaa
gtcatgcgcgacggctggttccttaccggtgacatcggcgtgatggatgctgacggctat
ttctcggtcgtcgaccgcaagaaggatatgatcctggtgtccggcttcaacgtctatccg
aacgaggtcgaggattgtttggcgtctcatcccgggatttttgaatccgccgtcattggc
gtgccggatgatgacacgggagaagcggtgaaagcctttgttattcttgataattcaagc
ctgacaccggaagaaatccgggcgcactgcaagaaacatctgaccggctacaaggtgccc
aaaattatcgaataccgggaagacttgccgaaatcgaacgtcggcaagattttgaggaag
gatctgcgcgccgaagcgtaa
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