Labrenzia sp. VG12: CHH27_00045
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Entry
CHH27_00045 CDS
T04984
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
labr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_00045
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CHH27_00045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_00045
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CHH27_00045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
DUF5790
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
ASP31823
UniProt:
A0A222F0P9
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All DBs
Position
complement(12912..13868)
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AA seq
318 aa
AA seq
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MFMKKALGAVAAVGLLAFAGTAIAQDKIKIGVSYPTPTHAWAAGMNWHAEQAEKRLEELY
PDVDLILVNSPDPEAQASALEDLVSVHQIDALVVLPFESEPLTDPVLNVKKSGAWITVVD
RGLSQPGIEDLYVAGNNPELGRVSAQYMKGRLKDGDNIVVLRGIPTVIDNERFDAFMAEI
EGSGINVLDHKHANWNRDDGFEVMQDFLSRFPDIDAVWAQDDDIAIGVVAALKQAGRDGN
GMFVVGGAGMKEIIKGIMDGDELIPVDVLYPPAMIATAMDATVQAFKSNGPVAGRYILGA
TLITKENAESYYFPDSPF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgaaaaaagctctgggcgcagtagccgccgttggcctgttggccttcgccgga
accgcgattgcccaggacaagatcaagatcggcgtcagctacccgacaccgacccatgcc
tgggccgccggcatgaactggcacgcggaacaggctgaaaaacggctcgaggagctttat
ccggatgtggacctgatcctggtcaactccccggacccggaagcccaggccagcgcgctg
gaagatctggtttccgtccaccagatcgatgcccttgttgttctgccgtttgaatccgag
ccgctcaccgacccggttctgaacgtcaagaaatccggtgcctggatcacagttgttgac
cgtggtctcagccagccgggcatcgaagacctttatgttgctggcaacaacccggaactc
ggccgcgtttccgcacaatacatgaagggccgcctgaaagacggtgacaacatcgtcgtc
ctgcggggcattccgaccgtgatcgacaacgagcgtttcgatgcgttcatggcggaaatc
gagggatccggcatcaatgtgcttgaccacaaacacgccaactggaaccgcgacgacggc
tttgaagtgatgcaggacttcctgtcccgcttcccggacatcgatgccgtctgggcacag
gatgacgacattgccatcggtgttgttgctgccctgaaacaggccggccgtgacggtaac
ggcatgtttgtcgtcggcggcgccggcatgaaagagatcatcaagggcatcatggatggt
gacgaactgatcccggtcgacgttctttatccgccggcaatgatcgcaaccgccatggat
gcaacggttcaggccttcaagtccaacggaccggttgccggccgctacattctcggtgcg
acgctgatcacgaaagagaacgccgaaagctactacttcccagactcgccgttctaa
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