Labrenzia sp. VG12: CHH27_00335
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Entry
CHH27_00335 CDS
T04984
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr01501
beta-Lactam resistance
labr02010
ABC transporters
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_00335
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_00335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CHH27_00335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_00335
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CHH27_00335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASP31870
LinkDB
All DBs
Position
79789..81375
Genome browser
AA seq
528 aa
AA seq
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MFKSMRVTALAAALMAATSLTAMAEVVYHRGNTADPETLDQHKTSTTYEAHILRDLYEGL
VSYSAEGKVIPGVATDWSVSDDGTVYTFTLRDNAKWSNGDPVVAGDFEYSLRRIMTPETG
AKYATVLYPIKNAEKINKGELKPEDLGVKAVDDKTLEITLEQPTPYFIDLLAHQTGLPVH
PATVDAHGTDFVKPENIVTNGAYTLAEFIPNAHVKATKNPHFHDADNVKIDTVFFYPTED
RGAAMRRFQAGELHTNNDAPTEQVAFMRENLGDQFRVAPYLGTYYYALNHEDEALSNPDV
RQALSMSIDREFLADEIWASTMVAGYSFVPPGIGNYGESAFADYKDMSQIDREEKAIELL
QKAGYGPDNPVKLTINYNTSENHKNTAVAIADMWAPLGVEVSMVNTDTKTHYAMLRDRQD
FDVARAGWIGDYSDPQNFLFMVESDNTGFNYARYENPEYDALMDEAAATVDLEKRADILK
KAEEMFMRDLPFIPLMYYGSMNLVSDKVAGFEDNLLNIHPTRWMSISE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtccatgcgtgtgacagcgttggcggctgccttgatggctgccacatctctt
acggcaatggccgaggtggtctaccaccgcggcaatacggctgatccggaaaccctggac
cagcacaagacctccacaacttatgaggcgcatatcctgcgcgacctttacgaaggtctg
gtgtcctacagcgccgaaggcaaggtgatcccgggtgtggcaaccgactggtccgtttcc
gatgacggcaccgtctacaccttcaccctgcgcgacaacgccaagtggtccaacggcgac
ccggttgttgccggcgatttcgaatattccctgcgccgcatcatgacgccggagaccggt
gcgaaatacgcaaccgttctctacccgatcaagaacgccgaaaagatcaacaagggcgaa
ttgaagccggaagatctcggcgtcaaggcggtcgacgacaagacgctcgaaatcacgctc
gagcagccgaccccgtatttcatcgacctgctggcgcaccagaccggcctgccggttcac
ccggcaaccgttgatgcccatggcacggatttcgtgaagccggaaaacatcgtcaccaac
ggtgcctacaccctggccgagttcatcccgaacgcgcatgttaaggcgaccaagaacccg
catttccatgatgcggacaacgtcaagatcgacaccgtcttcttctacccgaccgaagac
cgcggtgccgcaatgcgccggttccaggccggtgagctgcacaccaacaacgatgcgccg
accgaacaggtggccttcatgcgtgagaacctgggcgaccagttccgcgtggcgccgtat
ctcggtacctactactacgccctgaaccatgaagacgaggctctgtccaatccggacgtg
cgccaggcgctttccatgtcgatcgaccgcgagttcctcgctgacgagatctgggcgtcc
accatggtcgccggctattccttcgtaccgccgggaatcggcaactacggcgaatccgct
ttcgcggactacaaggacatgtcccagatcgaccgtgaagaaaaagcgatcgagctcctg
caaaaggctggttatggcccggacaatccggtcaagctgaccatcaactacaacacttcg
gaaaaccacaagaacacggcggtcgcgatcgccgacatgtgggccccgctgggtgtggaa
gtgtcgatggtcaacaccgacaccaagacccactatgccatgctgcgtgaccgtcaggac
tttgacgtcgcccgcgccggctggatcggcgactactccgacccgcagaacttcctgttc
atggtcgagagcgacaacaccggtttcaactacgctcgctacgagaacccggaatatgat
gcgctcatggatgaagctgctgcgacggtcgatctggagaagcgcgccgacatcctgaaa
aaggccgaagagatgttcatgcgtgacctgccgttcatcccgctgatgtactacggctcc
atgaacctggtctccgacaaggtcgccggatttgaggacaacctcctcaacatccatccg
acccgttggatgagcatctccgagtaa
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