Labrenzia sp. VG12: CHH27_00505
Help
Entry
CHH27_00505 CDS
T04984
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labr03000
]
CHH27_00505
Transcription factors [BR:
labr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CHH27_00505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_10
HTH_24
HTH_AsnC-type
HTH_AraC
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ASP36540
UniProt:
A0A222FCS0
LinkDB
All DBs
Position
117014..118057
Genome browser
AA seq
347 aa
AA seq
DB search
MKWFGNLRATIADVAREAGVSAMTVSRALRDPDKVSAKTRVKIQAVVDRLGYVPDPAASA
LAAGKTNVIGVIVPSVTNNVFSDVMRGVYEVAEGSKWQIQLGNSRYSPLEEENLVRTFLS
QKPAGLILSGLDQSDETSKLLMSADCRIVQIMECGPDPFDMMIGFSHVEASAAATRHLLE
EGYRRPGYIAARLDPRSQRRLAGFKAEAEKAGVFSAGRIVTTPRPSTVTLGCELVADLLS
KAPETDAILCNNDDLALGALFECQRRGLRVPEDFGICGFNDLEMMAAANPSITSVRTYRL
DMGREAFEMLTRALGGNEPGQALIDLGYEVVGRQSTARHGTVKPVPA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtttggtaatttgagagcaacaattgccgatgtcgccagagaagctggtgtt
agcgctatgaccgtttcacgcgctttgcgcgacccggacaaggtttcggcaaaaacgcgg
gtcaagatccaggcggtggttgaccgcctcggctacgtccccgacccggcggcgagcgcg
ctggcggccggcaagaccaacgtgattggcgtgatcgtgccatccgtcaccaacaacgtc
ttttccgacgtcatgcgcggtgtttatgaagtggcagagggctccaaatggcagatccag
ctcgggaactcccgctattcgccgctggaagaggaaaatctcgtccgtaccttcctcagt
cagaagccggccgggctgatcctgtcgggtctcgaccagtccgacgaaacctcgaaactt
ctgatgagtgcggactgccgcatcgtccagatcatggaatgcgggcctgaccccttcgac
atgatgatcggcttttcccatgtcgaagcgtcggccgctgccacgcgtcacctgctggaa
gagggctatcgacggccgggttacattgccgcccggctcgacccgcgcagtcagcgccgc
ttggcaggtttcaaggccgaagcggagaaggccggtgtcttttccgccggtcggattgtc
acgacaccgcgtccctcgactgtaacgctcggctgcgagttggtggcggatctcttgtca
aaagcgcctgagaccgatgccatcctgtgcaacaacgatgaccttgcgcttggcgccctg
ttcgaatgccagcgccgggggttgcgcgttccggaagacttcggcatctgcggcttcaac
gacctggagatgatggcggcagccaacccgtccatcaccagcgttcggacctaccgtctg
gatatgggacgcgaggcgtttgaaatgctgacccgcgcgctgggtggcaacgagcccggg
caggccttgatcgatctgggttatgaagttgtcggccgccagagcaccgcaaggcacggc
acggttaagcccgttcctgcctga
DBGET
integrated database retrieval system
