Labrenzia sp. VG12: CHH27_01170
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Entry
CHH27_01170 CDS
T04984
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labr03000
]
CHH27_01170 (soxR)
Transcription factors [BR:
labr03000
]
Prokaryotic type
Helix-turn-helix
MerR family
CHH27_01170 (soxR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_17
HTH_24
HTH_11
HTH_3
HTH_5
Sigma70_r4
HTH_20
HTH_23
WHD_DprA
wHTH-HSP90_Na-assoc
HTH_IclR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ASP36552
LinkDB
All DBs
Position
264378..264848
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AA seq
156 aa
AA seq
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MTGADPLTIGELAERTGLSVSAIRFYEDKGLVHPSRNAGGQRRFLRADIRRLSFVLVAQE
FGFSISEIAEQLKRLPEGRAPTKADWSRISREFRAHLDQRIERMTALRDKLESCIGCGCL
SLKSCQLYNAGDAAASKGRGPRYLLGDSPDLKVSDT
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtgctgatcccttgaccatcggcgagctggcggaaagaaccggtttgtccgtg
tcggccatacggttttacgaagacaagggcctggtgcaccccagccgcaatgcaggtgga
cagcgccgcttcctgcgcgccgacattcggaggctgtccttcgtgctcgtggcccaggaa
ttcgggttttccatttcagagatcgcggagcagttgaagcgtttgccggagggcagggcg
ccaaccaaggccgactggtcgcgcatcagccgtgaattccgcgcacatctcgatcagcgg
atcgagcgcatgacggccctgcgcgacaaactggagtcctgcatcggctgtggctgcctg
tccctgaaatcctgccagctctacaatgccggcgatgcagccgcgagcaaggggcgggga
ccgcgctatctgctcggtgacagcccggatctcaaggtttcagacacatga
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