Labrenzia sp. VG12: CHH27_01405
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Entry
CHH27_01405 CDS
T04984
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_01405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_01405
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CHH27_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
HTH_39
Motif
Other DBs
NCBI-ProteinID:
ASP32055
UniProt:
A0A222EYQ8
LinkDB
All DBs
Position
304600..305739
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AA seq
379 aa
AA seq
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MDSTKRYERLRERYLNGDLDRRKFLGLIGAAGLAYGVQTPFSRQALAAAEEVRFDGWGGV
VSEAFRKYAFDPYTEKTGVKVVDGTFGGGDEYLSRVKASQEGEYNIAHLSGVFDYARYVN
LGLNSTLNEANIPNLEYVIPKLTDVFRGVTDGKLSCVPYDYGTTGIAYNRKYISDEEAKE
KGAKLLIDAAYKGKIGGWSDWRTRVWYASLQTGQDPNNATDMDAVWDAVRTNRDLLLKYW
QSGAELMSLLAEEEIYVTEGWSGRIYALQEQGHDIGYIDPPNGFGWQECLFVIKGSPMAE
VEELLNFMLAPETSIAVAEGQNYPPALDPNKVDLGDKIPTLPAFDPTGTLSGLTFANPDY
WNGHEADWSKTFGRIQKGY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacagcacaaaacgttacgaacgcttgcgtgaacgctatctcaacggcgacctcgac
cgccgcaaattcctcgggctgatcggcgccgctggtcttgcctatggcgtgcagacgccg
ttttcgcgccaggctcttgcggcggccgaagaggtccgtttcgatggctggggcggtgtc
gtctccgaagccttccgcaaatatgcctttgacccctacaccgaaaagaccggcgtcaag
gtggtcgacggcactttcggcggcggtgacgaatacctctcccgcgtcaaggccagccag
gaaggcgaatacaacatcgcccacctttccggcgtcttcgactacgcacgctatgtcaat
ctcgggctgaactcgacactcaacgaggccaatatcccgaaccttgaatacgtcattccg
aagctgaccgacgtgttccggggtgtcaccgacggcaagctctcctgcgtgccctatgac
tacggcaccacgggcattgcctataaccggaaatacatctccgatgaggaagccaaggag
aagggtgcgaagctcctgatcgacgcagcttacaagggcaagatcggcggctggtccgac
tggcgcacccgtgtctggtacgcctcgctccagaccggtcaggatccgaacaacgccacg
gacatggacgcggtctgggacgccgtacgcaccaatcgcgatcttctgctgaaatactgg
cagtccggtgccgagctgatgagcctgctcgccgaagaagagatctatgtcaccgagggt
tggtccggccgtatctatgcgctgcaggaacagggccatgacatcggttacattgacccg
cccaacggtttcggctggcaggaatgcctgtttgtcatcaagggctcgccaatggccgag
gtcgaggaattgctcaacttcatgctggcgccggaaacctccatcgccgttgccgagggc
cagaactacccgccggcgcttgatccgaacaaggtggatctgggcgacaagatcccgacc
ttgccggccttcgatccgaccggcaccctttccggcctgaccttcgccaacccggactac
tggaacggccacgaagcggactggtccaagacattcggccggatccagaagggttattga
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