Labrenzia sp. VG12: CHH27_02105
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Entry
CHH27_02105 CDS
T04984
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
labr
Labrenzia sp. VG12
Pathway
labr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHH27_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_02105
DNA repair and recombination proteins [BR:
labr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHH27_02105
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CHH27_02105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ASP32182
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All DBs
Position
complement(462356..463111)
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AA seq
251 aa
AA seq
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MEWIGRGVVLTTRKHGENDVILEAMTEDHGRHLGLVRGGRSRRHRPVLQPGNALALTWKA
RLSDHLGQFQVEPETLRAGDLMTSGLGLAGIQHLAVLLRLLPERHPYPGLFDALGVVLDH
LETADAAGALLIRFELELLKVLGLGLDLTRCAATGEQEDLIYVSPKSARAVSRDAGRPYH
DKLLPLPSFLLDGQRQAGSELTWRDVTEGFGLTGFFLDRHLAENGLVQGGSRELLLGALE
KRYRAEFPWNF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggagtggattggacgcggcgtggtgctgaccacccgcaaacatggtgaaaatgacgtc
atcctggaggccatgaccgaagatcatggccgccatctcgggctcgtccgcggtggccgg
tcgcggcgccatcgaccggtgctccagccaggcaacgcgctcgcgcttacctggaaggca
cgtctttcagaccatctggggcagtttcaggtcgaaccggagaccttgagagccggcgac
ctgatgaccagcgggcttggacttgccggtatccagcaccttgccgttctgcttcgcctc
ttgccagaacgtcatccctatcccggcctgttcgacgcgcttggcgtggttctagaccat
ctggaaacggcagatgcggccggagcactgctcatccgctttgaactggagttgctgaaa
gtgctcggtctggggctcgacctcactcgctgtgcagcgacaggcgagcaggaagacctg
atttacgtttcgcccaaatcggcgcgagccgtcagccgagacgccggccggccctatcat
gacaaattgctgccgcttccctcctttcttctggacggtcaacgccaggcaggcagtgaa
ctgacgtggagagatgtcacggaagggtttggtctcaccgggtttttcctcgaccggcat
ctggctgaaaacggtctggtgcaaggtggcagccgcgaattgctgcttggagcccttgaa
aaaagatatcgcgccgaatttccatggaatttctga
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