Labrenzia sp. VG12: CHH27_02145
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Entry
CHH27_02145 CDS
T04984
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHH27_02145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
labr03021
]
CHH27_02145
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_02145
Enzymes [BR:
labr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHH27_02145
Transcription machinery [BR:
labr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHH27_02145
DNA repair and recombination proteins [BR:
labr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHH27_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
ASP32189
UniProt:
A0A222F049
LinkDB
All DBs
Position
complement(469871..470272)
Genome browser
AA seq
133 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLAAHRARMISSGSPLTIDRDNDKNPVVALREIAEQTVSP
EDMKEDLIHSLQKFVEVDEPEAEAVPLVPAPGQQQMTQVKQVDDSAVEFDRMSEEDLLRG
LEGLVPPERTDDV
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtgaccgtcgaggactgcatcgacaaggtcgaaaaccggtttgagctggtg
ctgcttgctgcgcatcgcgctcgtatgatctcgagcggttcgccgctgacgattgaccgt
gacaacgacaagaaccctgttgttgcactgcgggagatcgccgagcagaccgtcagcccg
gaagacatgaaagaagacctgatccattccctgcagaagtttgtggaagtggatgagccg
gaagccgaagccgtgccgctggtgcccgccccgggtcagcagcagatgacgcaggtgaaa
caggttgacgacagcgcggtcgagtttgatcgcatgtctgaagaagacctcctgcgcggc
ttggaaggtctggtgccgccggagcggaccgacgacgtctga
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