Labrenzia sp. VG12: CHH27_02895
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Entry
CHH27_02895 CDS
T04984
Name
(GenBank) peptidoglycan-binding protein LysM
Organism
labr
Labrenzia sp. VG12
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Gene cluster
GFIT
Motif
Pfam:
LysM
Big_13
Peptidase_C25_C
Motif
Other DBs
NCBI-ProteinID:
ASP32317
UniProt:
A0A222EZW0
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Position
626153..627916
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AA seq
587 aa
AA seq
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MNKKTLVWTLIVAVPVGLAALATAFIYRDTGKLPFQQAAETTTAPAGPTETGQVETAVSP
QDASTPEETAQSETAPDQDQSIKGPSFDVVGVEPTGETVVAGRSDAGAIVALTANGKVVG
KSIANEAGEWTIILDEPLKPGDYDVGLEVHDEAGDPVATSEERLAVSLPEGGKEQPLVVL
NSPDGPSDVLQKPETEQQVAAVQPEQEPQQQAAAEPTAPTGDAAPQNTQAASAPQADDSQ
QPETSASQQAKAEPAAPAAEQVAAASQESQPASSDQIAPAAQAEAGEAETASGDAAQVAA
AEGTGNTSQPEATETAATTSSDNGSAPAAAEQTAAAAQTPETDAGEETQVASRSVQPSEP
AQSEDQPAAAASEQPASQVEQAPADNQPVEATAPATLAPQPEAAPAEPTVTVEAVESETD
KVFVAGTGEPGSSVRVYVGDEFQGEAEVNASGKWLVQGTKNIAEGNVEVRADLIAEDGNA
VDARAAVTFEKEQDKQIVLTKVVASGASGDAAGQGAEVKKTLPVVIIRKGDNLWRISRRL
YGEGVRYTTIYQANQDQIRNPDLIYPGQVFLTPEGDLNWKQPVENNG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaacactcgtctggactttgatcgtggctgtgccggttgggcttgctgcg
ctggccaccgcctttatctaccgggacaccggcaagctgcccttccagcaggcggccgaa
acgacaacagcacccgcaggaccaaccgaaaccggccaggtcgaaaccgccgtatccccg
caggacgcgagcactcctgaagaaactgcgcagtctgaaaccgcgcccgatcaggatcag
agcatcaagggaccgagctttgacgtcgtcggcgtggagcccactggtgagacggtggtc
gcaggccggtcggatgccggtgccattgttgccctgactgcaaatggcaaggtggtcggc
aagagcattgccaacgaggccggggagtggaccatcatcctcgatgagccgctcaaaccg
ggcgactatgacgtcggtctggaagttcatgacgaggcgggcgatccggtggcaacgtcc
gaagaacgcctggccgtatcgctaccggaaggcggcaaggaacagccgctggtcgtcttg
aattcgccggatggtccgtccgacgttctgcagaaaccggaaacggaacagcaggtcgcc
gcggtccagcctgagcaggagccgcaacagcaggccgctgctgaaccgacagcgccgacc
ggagacgcagcacctcagaacacgcaagcagcttctgccccgcaagcggatgacagccag
cagcctgaaacatctgcctcgcaacaggcaaaggctgaaccggccgctccggcggcagag
caggtcgcagcagcctcgcaggaaagccagccggcatcgagcgaccagatcgcaccggct
gcccaggcagaggcaggcgaagcggaaacggcgtcgggtgacgcagctcaggttgcggca
gcagaaggcaccggcaacacctcccagccagaggcaaccgaaacggctgccacaacgtct
tcggataatggatcagcacctgcagccgcggaacagacggcggccgccgcgcagacgccg
gagacagacgctggcgaagaaacgcaagtggcgagccggtctgtccagccatccgagccg
gcacagtccgaagaccaaccggctgctgcggcgagtgaacaaccggcgtctcaagtggaa
caggctccggccgacaatcagccggtggaggctacggcgcctgctacgttagcgcctcag
cctgaggcggcgccggcagaaccgactgttacggttgaggccgtcgagtcggagaccgac
aaggtctttgtggccggaacgggtgagccgggctcctctgttcgcgtctatgtcggcgac
gagttccagggcgaggccgaagtcaatgccagcggcaagtggctggttcagggcaccaag
aacattgccgagggcaatgttgaagtgcgtgccgacctgattgcggaagacggcaatgcc
gtggatgcgcgggccgccgtcaccttcgagaaggaacaggacaagcagatcgttctgacg
aaggtcgtcgccagcggcgccagcggcgatgccgcggggcagggtgcggaagtcaagaag
accctgccggtggtgatcatccgcaagggcgacaacctctggcgcatttcacgccgtctc
tatggggaaggggttcgctacacgaccatctatcaggcgaaccaggaccagattcgtaat
cctgacctgatctatccaggtcaggtgttcctgacaccggaaggcgatctgaactggaag
cagccggtcgaaaacaacggctaa
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