Labrenzia sp. VG12: CHH27_03015
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Entry
CHH27_03015 CDS
T04984
Name
(GenBank) hypothetical protein
KO
K17713
outer membrane protein assembly factor BamB
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_03015
Transporters [BR:
labr02000
]
Other transporters
Pores ion channels [TC:
1
]
CHH27_03015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ
Beta-prop_ACSF4
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-ProteinID:
ASP32339
LinkDB
All DBs
Position
652173..653525
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AA seq
450 aa
AA seq
DB search
MSFVSFSHRSRGVFGVLALSIALTGCGSVSDFAGSVNPFSREKILPGERQPVFDGADPAA
VAAGQSARIGNATGGQTWTTAGGGLTNDPGNVAVSVSGNRAWRAQVGSSGRGLTSAALRL
SSRPVSDGSRIYVYKPNGEVVALSTGGGRQWTQNLRPEGERDVGPGGGVTVAGGTVYAAT
SYRQVAALEAGSGREIWKVDIDTPARGAPVAGNGHVFVVTQSNEVYALNQSDGSIAWTYA
GIEETAGLLSAANPAISGNRVIVPFSSGEIMAINIKDGEPAWIDGVSRGFRTLALSGLAD
VSASPVVAGNTVYATGVSGRTVAVDARTGQRRWEQNLGSVHTPVVSGSALFMVDLDDRMV
ALDLKNGETLWATALPRPEKKKKRRNWAGPILANGSLVAFSSDGQIAMVDAASGNTMLTQ
RTNTDVYVTPIVAGGRVVVLTGNDGVAAFN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgagttttgtgagtttctcccaccgcagccgcggtgtgttcggcgtcctcgccctgtcg
atcgcgctcaccggatgtggttccgtgagtgatttcgccggaagcgtcaatccgttcagc
cgcgaaaagatcctgccgggcgaacgccagccggtgttcgacggggccgatcccgcagca
gtcgctgccggccagagtgccaggatcggcaacgcaacgggcggacagacctggaccact
gccggcggcggcctgaccaacgatcctggtaatgtggctgtctccgtatccggcaaccgc
gcctggcgcgcacaggtcggttcttccggccgtggattgacgtcggcggcattgcgcctg
tcttctcgtccggtcagcgacggcagccggatttatgtctacaagccgaatggggaagtg
gtggcactatccaccggcggtggccgccagtggacgcagaacctccgccctgaaggtgag
cgcgatgttggcccgggcggcggtgtgacggtcgccggcggcacggtctatgccgcgaca
agctatcgccaggtggccgcgctcgaagccggctccggccgggaaatctggaaggtcgac
atcgacacgcccgcacgcggcgcgcccgttgccgggaacggtcatgtttttgtcgtaacc
cagtccaacgaagtctatgccctcaatcaatccgacggttccattgcctggacctatgct
gggattgaggaaaccgctggactgctatctgcagccaatccggcgatttcgggcaatcgc
gtgattgttccgttctcttccggtgagatcatggcgatcaacatcaaggacggggaaccg
gcctggatcgatggtgtgtcccgcggcttccgcacacttgccctgtccggtcttgcggat
gtgtcggccagcccggttgttgccggcaacacggtttacgcgaccggcgtctccggccgc
accgtggccgtcgacgcacgcacaggccagcgtcgctgggaacagaacctgggcagcgtg
catacgcctgtcgtatccggcagcgcccttttcatggtggatctcgacgaccgcatggtg
gcacttgacctgaagaatggcgagacgctctgggcgacggcactgccgcgtccggagaaa
aagaaaaaacgccgcaactgggccgggccgatcctggccaatggctcgctggtggctttt
tcaagcgacggtcagatcgccatggtggatgccgcgtccggtaacaccatgctgacgcag
cggaccaacaccgatgtctatgtcacgccgatcgtggctggcgggcgggtcgtcgtgttg
accggcaatgacggcgtcgccgccttcaactag
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