Labrenzia sp. VG12: CHH27_03050
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Entry
CHH27_03050 CDS
T04984
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_03050
DNA repair and recombination proteins [BR:
labr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHH27_03050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
Lon_C
DUF7125
nSTAND_NTPase5
DnaB_C
AAA
AAA_22
RecA_N
nSTAND3
SLFN-g3_helicase
AAA_24
NTPase_1
ArsA_ATPase
DUF7129
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
ASP32345
LinkDB
All DBs
Position
complement(659488..660882)
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AA seq
464 aa
AA seq
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MARRSTSFVCQSCGAVTAKWVGRCESCGEWNTIVEEQTGGGVGGGPGRASRSKGRVVPLV
GLSGDTKEAPRISTKVAELDRVTGGGFVRGSALLVGGDPGIGKSTLLIQAAAQLAGLGHK
TVYISGEEAIGQVRLRAERLGLAGAPVALAAETSVEDILATLEADTAPALLILDSVQTLW
TDQVDSPPGTVTQVRASAQAMVRYAKKNGTTLVLVGHVTKDGQIAGPRVVEHMVDAVLYF
EGDGAHQYRILRSVKNRFGATDEIGVFEMTGKGLVEVPNPSALFLGDRNTSAPGAAVFAG
LEGSRPLLIEIQALVAQSTLGTPRRAVIGWDSARLSMILAVLEARCGVRFSQHDVYLNVA
GGLKINEPGADLAVAAALISSLSGLALPANCVYFGEVSLSGAVRPVAQAQSRLKEAEKLG
FDQAYCPEGNLKDSAASAFKATGVPELGDFVAKLSVEASAAGET
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgttccacctcatttgtctgccagtcctgcggcgccgttacggccaaatgg
gtcggccgctgcgagagctgcggcgaatggaacacgatcgtcgaagaacagaccggtggc
ggtgttggtggcgggcccggcagagcttcccgcagcaaggggcgcgtcgttcccctggtc
ggcctctcgggcgacaccaaggaagcgccgcggatcagcacgaaggtcgccgaactcgat
cgggtcaccggtggcggtttcgtgcgcgggtcggccttgctggttggcggcgatccgggc
atcggcaaatccacgcttcttatccaggcggccgcccagctcgccggacttggccacaag
acagtctatatctccggcgaggaagcgatcgggcaggtgcgcctgcgggccgaacgactg
ggccttgcaggcgcgcccgtcgcgcttgctgctgaaaccagcgtggaagacatcctggca
acgctggaagccgacacggcccctgccctcctgatcctcgattccgtgcagacgctctgg
accgaccaggtcgactcgcctccaggcacggtgacgcaggtccgcgcctcggcccaggcc
atggtccgctatgccaagaaaaacggcaccacactggtgctggtcggtcatgtcaccaag
gacggccagattgcaggcccacgcgtggtcgagcacatggtcgatgcggtgctctatttc
gaaggcgatggcgcgcatcagtaccggatcctgaggtcggtcaagaaccgcttcggcgcc
acggatgagattggcgtctttgagatgaccggaaagggacttgttgaagtgcccaatccg
tctgcgctgttcctgggggatcgcaacacctccgcaccgggcgctgccgtctttgccggt
ctggaaggctcccggccgttgcttatcgagatacaggcgcttgtggcgcaatccacactc
ggtacgccgaggcgtgcggtgatcggctgggacagcgcgcgcctgtcgatgatcctggcc
gttctggaagcccgctgcggggtgcggttttcccagcatgatgtctacttgaacgtggcc
ggcgggctgaagatcaacgagcccggcgccgatctcgccgttgcggccgccctgatctct
tcgctcagcgggcttgcccttccggccaattgcgtctatttcggcgaagtcagcctgtcg
ggcgccgtccggccagtggctcaggcccagtccaggctgaaggaagcggagaaactcggc
tttgaccaggcctattgtcctgagggaaatctcaaggacagcgccgcgtcggccttcaag
gcgaccggcgtgccggaacttggggactttgtcgccaaactctcggtggaggctagtgct
gcgggggagacctga
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