Labrenzia sp. VG12: CHH27_03200
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Entry
CHH27_03200 CDS
T04984
Name
(GenBank) glycosyl transferase family 1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
labr03012
]
CHH27_03200
Translation factors [BR:
labr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CHH27_03200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
SMC_N
AAA_21
ABC_tran_CTD
AAA_29
RsgA_GTPase
AAA_22
AAA_30
MMR_HSR1
AAA_23
NACHT
GDE_N_bis
BLOC1_2
Val_tRNA-synt_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASP32373
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Position
complement(690245..692131)
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AA seq
628 aa
AA seq
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MLQINDLTYRIGDRLLIDKASVTLPGKAKTGLVGRNGAGKSTLFKIITGELGTETGGVQI
PKRARIGQVAQEAPGTEDTLMEVVLAADTERSRLLMEAETETDPDRIAEIHTRLADIGAH
TAEARAGSILSGLGFDADAQQRPCSSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLE
GTLWLENYVSRYPHQVLLISHDRDLLNKAVDSIVHLERGKLTYYSGGYDSFDRQRREAMI
LAEKAKEKQDAQRKHMQAFVDRFRYKASKARQAQSRLKMLEKMQPIAALTDESSKPIHFP
DPEAQLAPPILKLEGVATGYGDTRILSRLTLNIDTDDRIALLGANGNGKSTFAKLISGRL
GAMDGEITKASKLKIAFFAQHQLDELKPAENSVAHVRALMPEAPEAKVRARVARMGLPTD
RMDTPAKDLSGGEKARLLLGLATFDGPHLLILDEPTNHLDIDSREALVMALNEFQGAVVL
ISHDRHLVEACADRLWLVADGKVAPYDGDMEDYRRLILQGPEAAQRARDKADAEDAEKAS
AQEKRREAAQKRSQLKPLKQKIDAAEKELARLQDKIGRLDEALADPEFFAKEPERATKFA
KERAFCEKKLVKTEEEWLELSAEFEEVS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaatcaatgacctcacttaccggatcggggaccggctcctgatcgacaaggcc
agcgtgaccctgcccggcaaggccaagaccgggctggtcggccgcaatggtgccggcaaa
tcgacgctcttcaagatcatcaccggcgagctcggcaccgaaactggcggcgtgcagatc
cccaagagagcccggatcggccaggtggcccaggaggcgccgggcacggaagacaccttg
atggaagtggtgctggcggccgataccgagcgcagccggctgctcatggaagcagaaacg
gaaaccgacccggaccggattgccgaaatccacacccgccttgcagatattggagcccac
acggctgaagcacgcgcggggtccattctctccggtctcgggtttgatgccgacgctcag
cagcgcccctgctcatccttttcgggcggttggcgcatgcgtgttgccctggctgcggtg
ctcttttccgagcccgatctgctgctgctggacgagccgaccaactatctcgatctggaa
ggcacgctctggctggagaattatgtctcccgctatccgcaccaagttctgttgatctcc
cacgaccgggaccttctcaacaaggccgtggacagcattgttcacctggaacgcggcaag
ctgacctactattccggcggctatgacagtttcgaccgtcagcggcgcgaagcgatgatc
ctggccgaaaaggccaaggagaagcaggatgcccagcgcaagcacatgcaggccttcgtc
gaccgctttcgttacaaggccagcaaggcccgccaggcgcaatcccggctgaagatgctg
gaaaaaatgcagccgatcgccgcattgacggatgaaagcagcaaacccatccatttcccc
gatccggaagcccaactggcaccaccgatcctgaagctggaaggcgttgccacgggctat
ggcgacaccagaattctgtcgcggctgacgctcaacatcgataccgatgaccggatcgcg
cttctgggggcaaacggcaacggcaaatcgacgttcgcaaagctcatttccggtcgtctc
ggcgccatggacggcgagattaccaaggcgtcaaagctgaagatcgcgttttttgcccag
caccagctggatgaactgaaaccggccgaaaactcggtggctcatgtccgcgccctgatg
ccggaagcgcccgaggccaaggtccgtgcgcgtgtcgcccgaatggggctgccgaccgac
cgcatggatacaccggccaaggatctttcgggcggggaaaaggcgcgtctgcttctgggg
ctcgccaccttcgacggtccgcacctgctgatcctcgacgaaccgaccaaccacctggat
atcgacagccgcgaagcgctggtcatggcgctgaacgagttccagggcgccgtggtgctg
atcagtcacgaccgccaccttgtggaagcctgtgccgatcgcctgtggctcgtcgcggat
ggcaaggtcgcgccatatgatggcgacatggaggattaccgccgcctgatcctgcaggga
ccggaggctgcgcaaagggcccgcgacaaggcggatgccgaagacgccgaaaaagcctcg
gcccaggaaaaacgccgggaagctgcccagaagcgcagccagttgaaaccgctgaaacag
aagatcgacgcggcggaaaaggaattggcccggcttcaggacaagatcggccgactcgac
gaggctctcgccgacccggagttctttgcaaaagaaccggaacgggcaaccaagtttgcc
aaggaacgggccttctgcgagaaaaaactggtcaagaccgaagaggaatggctggaactc
tccgccgaattcgaagaggtgtcctga
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