Labrenzia sp. VG12: CHH27_04070
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Entry
CHH27_04070 CDS
T04984
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_04070
Enzymes [BR:
labr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHH27_04070
DNA repair and recombination proteins [BR:
labr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHH27_04070
Prokaryotic type
CHH27_04070
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASP32518
UniProt:
A0A222F0U4
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Position
880489..881925
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AA seq
478 aa
AA seq
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MTTLVWFRQDLRIEDNPALLEASRRGPVLPVFIFETPEQSGETHPLGGASKWWLHHSLAA
LKDEMPGLVLMRGSARHLIPHLARTHDVDAVFWNRCYEPHAIERDTDLKVSLKEDGFEVR
SFKAALLFEPWELETKSGGPFKVYSPFWKTAQQQDVTPPLPAPEELTFVSPVEGVDLAEL
DLLPGKPNWAAGWEKLWRPGAVGAQERLSNFLAEGLAGYGDLRNRPDLPNVSRLSPHLHF
GDISPRQVWHATQTRMMSDAFLSKDRQKFLSELAWREFSHHLLYHFPKLPSGNWKPAFDA
YPWRESSEDLDCWQKGQTGYPIVDAGMRELWQTGYMHNRVRMVVASFLVKHLRLHWHHGE
AWFRDTLLDADLANNSASWQWVTGSGADAAPYFRIFNPITQGEKFDPHASYIRRWVPELA
GLDTAHIFAPFEAPKEALAAAGVKLGETYPHPVVNHAAARQAALEGYEAVKLAGQNAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgctagtttggtttcgtcaggatcttcgtattgaggacaatcccgcgcttctt
gaagcatcgaggcggggaccggttctgcctgtcttcatcttcgagacaccggaacaatcc
ggagagacgcatcccctgggcggcgcaagcaaatggtggctgcatcacagcctggcggcc
ctgaaagacgagatgccgggacttgtgctgatgcgcggcagcgcccggcacctgatcccg
cacctagcgagaactcatgatgtcgacgctgtcttctggaaccgctgttacgaaccccat
gcgatcgagcgggacacggatctgaaagtgtccttgaaggaagacgggtttgaggtcagg
agcttcaaggccgcgcttctttttgagccctgggagctggaaacgaaatccggcggtccg
ttcaaggtctattcgcccttctggaagacggcgcagcaacaggacgttacgccgccgttg
cctgctccggaagaattgaccttcgtgagccctgtggaaggcgtcgacctcgccgagctc
gatcttcttcccggaaagccgaactgggcggctggctgggaaaaactctggcgacccggc
gcagttggagcgcaggagcgtttaagcaactttctggcagaaggccttgccggctatgga
gatctgcgcaaccggccggatttgccaaacgtctcccggctgtcgcctcatctgcatttt
ggcgacatctcgccaaggcaggtctggcacgcgacgcaaacgcgcatgatgagcgatgcc
ttcctgtcgaaagacaggcagaagtttctgtccgaacttgcctggcgcgagttttcccat
catctgctctaccactttccaaagcttccttccggcaactggaaaccagcattcgacgcc
tatccctggcgcgagtcttctgaagacctggattgctggcaaaagggccaaaccggctat
ccgattgtcgatgccggcatgcgcgaactctggcaaaccgggtacatgcacaatcgagtt
cgcatggttgtcgcgagtttcctggtcaagcatctgcggcttcactggcaccacggcgaa
gcctggttccgcgacacgctgctcgacgctgatcttgcgaacaactcggccagctggcag
tgggtaaccgggtccggggcggatgccgcgccctatttccgtatcttcaacccgatcacg
cagggcgagaaattcgatccgcacgcgtcttatatccgtcgttgggttccggagctcgcg
gggctggacaccgcccatatctttgcgccctttgaagcgccgaaggaggcgcttgccgca
gccggggtcaaactgggtgaaacctatccgcacccggtcgtcaatcatgcggccgcgcgc
caggcggccctagaaggctacgaggcggtcaagctggcgggacaaaacgcggcttga
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