Labrenzia sp. VG12: CHH27_04140
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Entry
CHH27_04140 CDS
T04984
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_04140
Transporters [BR:
labr02000
]
Other transporters
Pores ion channels [TC:
1
]
CHH27_04140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
Motif
Other DBs
NCBI-ProteinID:
ASP32528
LinkDB
All DBs
Position
complement(897015..901361)
Genome browser
AA seq
1448 aa
AA seq
DB search
MRFINLSLRIFGFLIAIAIAVPLLVIGALQVQSGRDLVSGIASSLASTPEQSVRIEGLYV
SFGLDASIESLDISDKKGIWLSAQTIAFDWRPLRLLSGDLDITVLSARQIDLARPPQLPE
NTDTSATPGAEGTSGVSLPVNVSLERLSLQEINLGEDLLGAPVSLTASGSGAFALDPALV
TADLDVRRVDGIDAGLTAKARFEPSAETLQFDVSISEPRGGLAARLLDVPDLPALDLLLK
GSGPLTDWAADLSVALDGKSTVTGSASLQETASERHLSFDLDGLLADLAPPAAQAFVLGT
TDLTGTARFSSDFAPLAANLSARTQTLALDAKADLANDKMDVTAGLSVNAGGGALIALDV
GDRRIAFGPVTSQINVSGTQGAADWAADLELASFQTTELRTDRVQLKVSGNGADFSSGAL
TSPFALTLDVTGLDGLTQQTAALSGPLSVTGSGSISSGTQDVHLSELAVTSSATTLTLTD
TTLSPDKFSGKGRISVPDLAILSELAGRDLGGGIAGQFTADLDPSQLTGTATASLISKDV
SVAVPQADALLAGETRTDLTLDLSGTSDINLENLAIGNDQLNVSGKAHFADGNLTSALTA
SLADLSKADSQLAGSLELDATTSGPIEALEVKATAASKQILLAGTPLDNLTFSADAVANR
STPSARLKGAAALNEQAIAVDVELVSKDGGAELSPLSVKLAGNTVSGALTFADLNRPVET
LKGDLKIDAPDLASLSPLLLTDISGRLNGTISADPERKQLALDITGSGIDVPSLSLGSLK
MKANLAAPYAPETVSADIEINDLLTDATPVHSVNLQARPDNGGTSIGARIDLDSSGKDGL
ALQARVSQPDDGGYLLALSELAMRYQGLASKLTAPTTIAYTEGTATIAPLDLQLGDGSLS
LSGQAGEQLDLKAELKSVPLNLANAFAPSLGLGGSLSGNITATGSASAPQATWSITGTGL
TASELRNNGLAALSLTSSGDLKDNQISQTSKVSDPNGLNLSASGTVGLQQPNALALTLDG
TIPTAALRRPLLEAGIRAEGAIALKGTVGGSAKAPAYQITATPAGLRVTSLSTGLTVQNI
GGTAAVTQDQASLNGITGELATGGTLSAGGTVGMKNGFPTDLSIKLNKGRYIDPGLVSAE
VDADLKISGPLASTSSSALIGGTVTINKADVSIPEYLPGAIPPVEVRHVNASKAVRQQVA
ELGGDTQQRQTQQKTIPPRLDILLSAPGRIFIRGRGLDAELQGNLKIVGTTASPQAVGAF
SLKRGQLDILTRRLVFSRGSATFEGSLTPLLDFAASTTVSDTTITVTVSGEADDPQIAFT
SSPELPQDEVLALLLFGKSVGNLSATQVARLAAAIATLTGGSDSGPLASIRKSLGLDAID
INTDGEDGPSVAVGKYINDNIYVGVEQGTGSGSSRVKVDIDLDRGLKVRGEVGADGSSKA
GIFFEREY
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttatcaatctgtccttgcggatcttcggattcctgatcgcaattgcgattgcc
gtgccgttgcttgtcatcggcgcgctgcaggtgcagtccggacgcgatctggtatccgga
attgccagttcacttgcctccacaccagagcagtcggtcaggattgaggggctctatgtc
agctttggtctcgacgcctcgattgaaagcctggacatttcggacaaaaagggcatctgg
ctgtccgcacagacgatcgcgttcgactggaggccgctgcggctcctgtccggtgacctg
gacataaccgttctcagcgcccgccagatcgacctggcgcggcctccccagctgcccgag
aacaccgacacgtccgcgacgccgggtgcagaaggaacgagcggagtgtccctgccggtc
aacgtgtcgcttgagcggctgtcgcttcaagaaatcaaccttggcgaggacttgttgggc
gcgcccgtctccctgacagcctccggctcaggggcgtttgcgctcgacccggcacttgtc
acagcggatctcgatgttcgccgggtggacgggatcgacgcaggattgaccgccaaggcc
cggttcgaaccgtcggccgaaaccctgcaattcgatgtttccatctccgaaccacgtggc
gggttggccgcacgcctgcttgatgtgccggatttgcctgccctggacctcctattgaag
ggcagcgggccgctcaccgactgggctgccgacctgagcgtcgcgcttgatggcaaatcc
acggttacaggctccgccagcctgcaggaaaccgcttcggagcgccatctcagcttcgat
cttgatggccttcttgccgacctggccccacccgccgcccaggccttcgtgctcggcacg
acggacctcaccggcacagcgcggttttcgtcggattttgcgccgcttgcggccaatctt
tccgcccggacccagacgctcgccctcgatgcaaaggctgatctcgcgaatgacaagatg
gatgtcaccgccggtctgtccgtcaatgcgggtggcggggcactgattgcgcttgacgtc
ggcgatcgccgcattgcctttggaccggtgaccagccagatcaacgtctccggcacacaa
ggtgccgccgactgggcagccgatctagaacttgcctcttttcagacgacagaactgcgc
acggacagggtccagctgaaggtctccggcaatggcgcggatttcagctccggagcattg
acgtccccttttgccctgacgctcgacgtcacgggactggatggactaacgcagcagaca
gcagcgctgtccggtccgctttccgttaccggcagcggatcaatcagctctggaacgcag
gacgttcacctgtcggaactcgcagtcacgtcttcggccacgaccctcaccttgaccgac
acgaccctgtcgcctgacaaattcagcggcaagggacgcatttctgttcctgacctggcg
atcttgtccgaactggcaggaagagaccttggcggcggcatcgccggacaattcacagcc
gacttggatcccagccaattgacgggaacagccaccgcgtccctgatcagcaaggatgtc
tctgttgccgttccgcaggcggatgccttgctggccggtgaaacccgcacggacctgacg
ctggacctgagtggcacaagcgatatcaatctggaaaatctcgcaattggcaacgatcag
ctgaacgtttccgggaaggctcactttgccgatggcaacctgacctccgcgctgacggca
agcctcgccgacctgtcaaaggcagacagccaacttgccggcagtctggaacttgacgcg
acaacctcagggcccatcgaggctcttgaggtaaaggcgaccgccgcctccaaacagatc
ctcctggcaggaacgcccctcgacaatctgacattctcggccgatgccgttgcaaatcgc
tcgaccccctcggctaggctcaagggggcagccgcgctgaacgagcaagcgatagcggtt
gatgtggaactggtcagcaaggacggtggcgcggagctcagccccctgtcagtgaaactt
gccggaaacacggtctccggcgcattgaccttcgctgacctcaaccgcccggtcgagacg
ctcaagggcgatctgaagatcgacgcgccggacctggcttcgctctccccgctcctgttg
acggacatcagcggccgcttgaatggaactatctcggcagatcctgagcgcaagcaactt
gcactcgacatcacaggcagcggaattgatgtgccttcgctgagcctgggcagcctgaaa
atgaaggctaatctggcggcgccctatgcccccgaaacagtgtcggccgatatcgaaatc
aacgatctgctgaccgacgccacgcccgtacacagtgtcaacctgcaagcccggccggac
aatggcggcacgtcaatcggcgccaggatagatcttgatagcagcggcaaggacgggctc
gcgctacaagcaagggtcagccaaccggatgacggcggctatctgctcgcgctttcagaa
cttgccatgcgctaccagggcctggccagcaaactgacggcaccaaccacgattgcctat
accgagggcaccgccacgatcgcgccgctcgaccttcaactcggtgacggttccctgtcc
ctctccggccaggccggcgaacaactggacctgaaagccgagttgaaatcagtaccactg
aaccttgccaacgcctttgcgccgtcgctcgggctcggcggctctctctctggcaatatc
acggcaaccggcagcgcctccgcaccgcaggcaacctggtcgatcaccggtacggggctc
acggcaagcgaattgcggaacaatggcctggcagcgctcagcctgaccagttccggagat
ctgaaggacaaccagatttcccagacaagcaaggtcagcgacccgaacgggctgaacctc
tccgcctccggcactgtcgggctgcaacagcccaatgccctggccctgacactggacggc
acgatcccgacggcggcccttcggcggcctcttctggaggcgggcattcgggcggagggc
gcgattgccctgaaaggaaccgttggcggatccgcaaaagcacccgcctaccagatcacc
gcgacaccggccggcctcagggtcaccagcctgtcgaccggactgaccgttcagaacatc
ggcggtacggctgctgtcacacaggatcaggcctcgctcaacgggatcaccggcgagttg
gcaaccggcggaaccctgtcggccggtggtacagtcggcatgaaaaacggttttccgacg
gatctctcgatcaagctgaacaagggccgctacatcgaccccgggctggtgagcgcggaa
gtggatgccgatctgaaaatctctggaccgctcgcgtcgacctcttcatcggccctgatc
ggcggcacggttaccatcaacaaggcagatgtctccattccggagtatttgcccggcgca
atcccgcctgtcgaagttcggcacgtcaacgcgtccaaggcggtgcgtcagcaggttgcc
gagcttggaggcgatacccagcaacggcagacgcagcagaaaacgatcccgccacgcctg
gacatcctgttgtcggccccgggccgcatcttcattcgcggccgtggtcttgacgccgaa
ctgcaaggcaatctgaagatcgtcggcaccacggcttccccccaggcggttggcgctttc
agcctgaagcggggtcagctcgatattctaacccgtcgtctggtgttctcgcgcggcagc
gccacgtttgaaggctcactgacaccgctcctcgattttgccgcttccacgacggtcagc
gacaccaccatcacggtcacggtgagcggcgaggccgacgacccgcagatcgccttcact
tcctctcccgaattgcctcaggacgaggtgctcgcgctgctcctgttcggcaagagcgtc
ggcaatctgtcggcaacgcaggttgcccggctcgcggccgcaatcgccaccctgaccggc
ggcagcgacagtggccccctcgcctcgatccggaagtcgctcgggctcgatgcgatcgac
atcaataccgacggtgaggatggtccgtctgtcgccgtcggcaaatacatcaatgacaac
atctatgtcggggtcgaacagggaaccggcagtggctccagccgtgtgaaggtggatatc
gatcttgatcgcggtctgaaagtgcgcggtgaagtgggggccgacgggtcctcaaaagca
ggcatctttttcgagcgcgaatactag
DBGET
integrated database retrieval system