Labrenzia sp. VG12: CHH27_04250
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Entry
CHH27_04250 CDS
T04984
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_04250
Transporters [BR:
labr02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
CHH27_04250
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ASP32548
LinkDB
All DBs
Position
931618..933015
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AA seq
465 aa
AA seq
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MSQAKFVTGSLFRHVTVMSLTSSVGLMAIFAVDFVDMIFISMLGKAELAAAVGYAGAILF
FTTSFNIGVAIAAGALVARALGAGDREEARQQASNALVAGVIFSGVFALAVWLSLDLLVS
LIGAHGDTHDLAVHYLQIIVPTLPLLLLGMAGGAVLRAHGDAKRAMMATIAGGVVNAVLD
PILIFGLDLELTGAALASAASRVAIAFFALAPIFRFYGGLSLPRPLKLLKDLPPISAIAF
PAILTQLATPVGQAFVTRSMAEFGEEAVAGMAVVARMTPLAFATIFALSGAVGPIVGQNF
GAGKYDRVRGTLREALLFTALVVGLAALALFFLRTPIARLFDADGLALTLIFLFCGPLAL
AFFFNGALFVANAFFNNLGRPFYSTWMNWGRHTLGTIPFVMVGGALYGAPGVLIGQAAGG
VVFGIAAVVLVRVVIRDVETHHEASKGPGLFQRQARQVILFFSRR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggccaaattcgttacaggcagcttgttccgtcatgtcacggtcatgtcgctg
acgtcctcagtcggcctgatggcgatctttgccgtcgactttgtcgacatgatcttcatc
tccatgctcggcaaggcggaactggctgccgcggttggttacgccggcgcgatcctgttt
ttcaccacgtctttcaatatcggcgttgccattgcggccggcgctctggtcgcgcgggcg
cttggggcaggggatcgggaggaggcgcggcaacaggcctccaacgcgctcgtggccggg
gtgatcttcagtggcgtctttgcccttgcggtctggttgtcgctggacctgcttgtcagc
ctgatcggcgcccatggcgacacccatgatctggcggttcactatttgcagatcattgtg
ccaacgttgccattgctattgctcggcatggcggggggcgccgtgctcagggcccatggc
gatgccaagcgggcaatgatggcgacaattgccggcggcgtcgtcaatgcggtcctggac
ccgatcctgattttcggactggatctggaattgaccggcgctgccctggcgagcgccgcg
tcgcgcgttgcgattgccttttttgccctggcgccgatcttccggttttacggcgggctc
agcctgccgagaccgctcaagctcctgaaagacctgccccccatatccgccatcgccttt
cccgccatcctgacccagctggcaacacccgtcggccaggccttcgtcacgcgctccatg
gcggagttcggcgaagaggctgtcgccggcatggccgtggtcgcacgcatgacgccgctc
gcctttgccacgatctttgccctgtccggtgctgtcggacccatcgtcggccagaatttt
ggtgccggaaagtatgaccgggtgcgcggcaccttgcgcgaagcgctgctcttcacggcg
ctcgtggtcggcctggccgcgttggccctgttctttctcagaacgccgattgcgcgcctg
ttcgatgccgatggccttgccctgacgctgatcttcctgttttgcggcccgctggcgctg
gcctttttcttcaacggcgccttgttcgttgccaacgcgtttttcaacaatcttggccgg
ccgttttactccacctggatgaactggggccggcacacgctcgggacgatcccctttgtc
atggtggggggcgcactttatggcgctcccggcgtcctgatcggacaggctgccggcggc
gtcgtcttcgggattgccgcggtggtgctggtgcgcgtcgtgatccgcgatgtggagacg
catcacgaagcctcgaaaggtccgggcctgttccagcgtcaggcacgtcaggtcatattg
ttcttttcaagaaggtga
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