Labrenzia sp. VG12: CHH27_05495
Help
Entry
CHH27_05495 CDS
T04984
Name
(GenBank) AsnC family transcriptional regulator
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labr03000
]
CHH27_05495
Transcription factors [BR:
labr03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CHH27_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_11
HTH_1
Fe_dep_repress
HTH_Crp_2
HTH_20
HTH_27
TrmB
LexA_DNA_bind
MarR_2
Rrf2
HTH_CodY
DUF3320
HTH_5
NirdL-like_HTH
HTH_34
HTH_PafC
HTH_7
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ASP32766
UniProt:
A0A222F2B7
LinkDB
All DBs
Position
complement(1217406..1217927)
Genome browser
AA seq
173 aa
AA seq
DB search
MLKLDRRDLEILKVLASEGRISKADLAKRINLSPSPCWKRLERLEKAGIIQGYAASLSLK
NLAPHVTVFVTLELEHHRTEYFQKFERVIGDCDQVVACWAIGGGLDYLLQIVARDIDAYQ
RFMDGLLDRELSIVRYFTYVVTKPVKQMAAPPLEQLLSGFLGTEEETGAAELE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgacaggcgcgacctggagatcttgaaggtactggcctcggagggccgc
atttcaaaagccgaccttgccaaacgcatcaatctgagccccagcccttgttggaagcgc
ctggaaagactggaaaaggccggcatcattcaaggttatgccgccagtctttccctgaaa
aacctggccccgcacgtgacggtcttcgtcactctggaactggaacaccaccgcaccgag
tattttcagaaattcgagcgcgtgatcggcgactgcgatcaggttgttgcctgttgggcc
atcggtggcggtctggactatctgctgcagatcgttgcccgggacattgacgcctatcaa
aggttcatggacggcctgctcgaccgggaactcagcattgtccgctacttcacctatgtg
gtcaccaagccggtcaagcagatggcggcccctcccctggaacagctcctgtccggcttc
ctgggaacggaagaggagacgggcgcggcagaattggaatga
DBGET
integrated database retrieval system
