| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:labr00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHH27_07935 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:labr03021]
CHH27_07935 (rpoC)
03400 DNA repair and recombination proteins [BR:labr03400]
CHH27_07935 (rpoC)
Enzymes [BR:labr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHH27_07935 (rpoC)
Transcription machinery [BR:labr03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHH27_07935 (rpoC)
DNA repair and recombination proteins [BR:labr03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHH27_07935 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1720308..1724507)
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| AA seq |
1399 aa
MNHEVMNLFNQQAPTQTFDNIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERVLYFENYVVLEPGLTPLKQHQLLSEEDFVAAQDEYGEDAFTA
MIGAEAIREILMSMDLERESEKLRQEIAEATTELKPKKLAKRLKVIEAFMESGNRPEWMI
MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHQCGLPKKMALELFKPFIYSRLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARTLMMSTNNILHPANGGPIIVPSQDIVLGLYYLSIMAEGEPGEGMAFSDIGEIHHALA
NKVITLHTKIKGRFRSVDAEGNPTSEIIETTPGRMLIAELLPKHHEVPFEVCNKLMTKKD
ISKMIDTVYRACGQKETVIFCDRIMQLGFKNACNAGISFGMDDMVIPDTKQKLVAETASL
ATEYEQQYNDGLITQGEKYNKVVDAWAKCTDKIADEMMARIKAVQVDEESGRQKPMNSVY
MMSHSGARGSPQQMKQLAGMRGLMAKPDGSIIENPIISNFKEGLSVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDSIILEPDCGSERGITVAPIVDAGNVIASLGMRVLGRT
TAEDVINNQTGEVLVPKGTLIDEKDVDAIEAAKVQQIKIRSVLTCETETGVCATCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDSSFIESNVDGTIKIRNRS
VNRDSEGNLVAMVRNMSIVVIDSDGNERAVHRVAYGSKLHVDEGDSVKRGQRIAEWDPYT
RPMLAEVDGVVDFEDLVDGQSVQETADEATGITKRVVIDWRSSQRGADLKPAIVIKDAKG
AVSKTDRGSDARLMLSVDAVLSVQPGATVKAGDVLARIPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPAEEGVEPVEYLIPKGKHFHLQEGDAIE
KGEYILDGNPAPHDILAVKGVEALAAYLVNEIQEVYRLQGVTINDKHIEVIVRQMLQKIE
ITDPGDTEFFSGEQIDKLDFEEANRKAIDNARDPAKGVPVLLGITKASLQTRSFFSAASF
QETTRVLTDAAVNGKTDPLVGLKENVIVGRLIPAGTGGVMKRIRQIATHRDDLIQEAQRQ
QSSDSAEEGLLEDMTGAAE |
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| NT seq |
4200 nt +upstreamnt +downstreamnt
atgaatcacgaagtcatgaacctgttcaatcagcaggctccgacacagaccttcgacaat
atccggatctcgctggcgagcccggagaagatcttgtcctggtctttcggcgaaatcaaa
aagccggaaaccatcaactaccgtacgttcaaaccggaacgggacggcctgttctgcgcg
cgtatcttcggcccgatcaaggactacgaatgtctttgcggcaaatacaagcgcatgaaa
tacaaaggcgtcatctgtgaaaagtgtggcgttgaagtcaccttgtcgcgggttcgccgc
gagcgcatgggccacatcgaactggccgcaccggttgcgcatatctggttcctgaagtcc
ctgccgagccgcatcggtctgctgctcgacatgacgctgaaggatctggagcgcgttctc
tatttcgagaactacgtggttctggagccgggcctgaccccgctcaagcagcaccagctg
ctttcggaagaggacttcgttgccgctcaggacgaatatggcgaagacgcattcaccgcc
atgatcggcgcggaagcgatccgcgagatcctgatgagcatggatcttgagcgcgaatcc
gaaaagctgcgccaggaaatcgccgaggcgaccaccgagctgaagccgaagaagctggcc
aagcgcctgaaggtcatcgaagccttcatggaatccggcaaccgcccggaatggatgatc
atgaccgtggtgccggtgatcccgccggatctgcgtccgctggttccgctggacggcggc
cgcttcgcgacctcggatctgaacgatctctaccgccgcgtgatcaaccggaacaaccgt
ctgcgccgcctgatggaactgcgtgctccggacatcatcatccggaacgagaagcgcatg
cttcaggaatccgttgacgccctgttcgacaacggccgccgcggccgtgtcatcaccggt
gccaacaagcgtccgctgaagtcgctgtccgacatgctgaaaggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcaccgtgggt
ccggaactgaagctgcaccagtgcggtctgccgaagaagatggcgcttgagctgttcaag
ccgttcatctattcgcgcctcgacgccaagggcttctcctcgacggtcaagcaggccaag
aagctggttgaaaaggaacgtccggaagtctgggacatcctcgacgaggtgatccgcgag
catccggttctcctgaaccgcgcgccgacgcttcaccgtcttggtatccaggcgttcgag
ccgaccctgatcgaaggcaaggccatccagctgcacccgctcgtctgttccgcgttcaac
gccgacttcgacggtgaccagatggctgttcacgtgccgctgtcgctggaagcccagctg
gaagcgcggacgctgatgatgtcgacgaacaacattctgcacccggcaaacggtggcccg
atcatcgtgccgtcgcaggatatcgttctcggtctctactacctctccatcatggcggaa
ggtgagccgggcgaaggcatggccttctccgacattggcgagatccatcacgcgctggcc
aacaaggtcatcacgctgcacaccaagatcaagggccgtttccgctctgtcgacgccgag
ggcaacccgacgtcggagatcatcgaaaccacccctggccggatgctgatcgcggaactt
ctgcccaagcaccacgaagtgccgttcgaggtctgcaacaagctgatgaccaagaaggac
atctccaagatgatcgacacggtttaccgtgcctgcggtcagaaggagacggttatcttc
tgtgaccggatcatgcagctcggcttcaagaatgcctgtaacgccggcatttccttcggc
atggacgacatggtcatcccggacaccaagcagaagctggtggccgagaccgcgtcgctc
gcaaccgaatacgagcagcagtacaatgacggtctgatcacccagggcgagaagtacaac
aaggttgtcgacgcctgggcgaaatgtaccgacaagatcgccgacgagatgatggcccgc
attaaggcggtccaggtcgacgaggagagcggacgccagaagccgatgaactcggtctac
atgatgtcccactccggtgcccgtggttcgccccagcagatgaagcagcttgccggcatg
cgcggcctgatggccaagccggacggctccatcatcgagaacccgatcatctcgaacttc
aaggaaggcctgtcggttctggagtacttcaactccacccacggtgcccgtaagggtctg
gctgacaccgccttgaagaccgcgaactccggttacctgacccgccgtctggtggacgtt
gcccaggattccatcatccttgaaccggattgtggctccgagcgcggcatcaccgtggcg
ccgatcgttgatgccggtaacgtcattgcctctctgggcatgcgtgttctcggccgcacg
accgctgaagacgtcatcaacaaccagaccggcgaagtgctggtgccgaagggcacgctc
atcgacgagaaggacgttgatgccatcgaggccgccaaggttcagcagatcaagatccgt
tcggttctgacctgtgaaaccgagaccggcgtctgtgcgacctgttacggtcgtgacctg
gcacgcggtacgcctgtgaacatgggtgaagctgtcggcgtcatcgccgcgcagtccatc
ggtgagccgggcacccagctgaccatgcgtaccttccacatcggtggtacggcgcaggtt
gtcgacagctcgttcatcgagtccaatgtcgacggcacgatcaagatccggaaccggtcg
gtcaatcgcgacagcgaaggcaacctggttgccatggtccgcaacatgtccatcgttgtc
atcgacagcgacggcaacgagcgtgccgtgcaccgtgtcgcctacggctccaagctgcat
gtcgacgagggcgacagcgtcaagcgcggccagcgcatcgcggaatgggatccttacacc
cgtccgatgctggccgaagtcgacggtgtcgtggacttcgaagacctggtcgatggtcag
tccgttcaggaaacggccgacgaggcaaccggtatcaccaagcgtgtcgtcatcgactgg
cgttcctcgcagcgcggtgccgatctgaagccggccatcgtcatcaaggacgccaagggg
gcggtttccaagaccgaccgtggctccgatgctcgcctgatgctgtccgttgacgcggtt
ctctcggttcagccgggtgccacggtcaaggccggtgacgttctggcgcgtattccgctg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgcgttgcagaactgttcgag
gctcgccgtccgaaggatcatgcgatcatcgccgaaatcgatggtacgatccgcttcggc
cgcgactacaagaacaagcgccgcatcatcatcgagccggcggaagagggcgtcgagccc
gtcgaatatctcattccgaaaggcaagcacttccaccttcaggaaggcgatgccattgaa
aagggtgagtatatcctcgacggcaacccggcaccgcacgacatcctggcggtcaagggc
gtggaagcgctcgccgcgtatctcgtcaacgagatccaggaagtctaccgcctgcagggc
gtgaccatcaacgacaagcacattgaagtgattgtccgccagatgctgcagaagatcgag
atcaccgatccgggcgacacggagttcttctccggcgagcagatcgacaagctcgacttc
gaagaagccaaccgcaaggcgatcgacaacgcacgcgatcctgccaagggggttccggtt
ctgctcggtatcaccaaggcatcgctgcagacccgttcgttcttctctgccgcctccttc
caggagacgacccgcgtcctcaccgacgcagcggtcaacggcaagaccgacccgctggtc
ggcctgaaggaaaacgtgattgtcggccgtctgatcccggccggtaccggtggggtcatg
aagcgcatccgccagattgcaacgcaccgtgacgacctgatccaggaagcgcagcgtcag
cagtcttcggacagtgccgaagaaggcctcctggaagacatgacgggtgcagccgaataa |
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