Labrenzia sp. VG12: CHH27_09225
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Entry
CHH27_09225 CDS
T04984
Name
(GenBank) mechanosensitive ion channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_09225
Transporters [BR:
labr02000
]
Other transporters
Pores ion channels [TC:
1
]
CHH27_09225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
ASP33403
LinkDB
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Position
complement(1974717..1977113)
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AA seq
798 aa
AA seq
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MRLPHTLSRPLNLKPARVRNAFRFLSVLFTVLLVFSATSLPVQAQGLTGVISGMAASGET
DDKAANDKVAAETADDEAAHEEGDEEGGGILGSVDEFADEAVAARDVFKSILKEIPTIHD
TMLETLQDEGEGQGLSWIPTALMDIVIAAAFGIAASILLARWGRRQFASMYKEDAYSRSD
KIIYLYLRALLMIVGVVLFFAVSVLVFLLIGSGLEAANETAMVVFGVVAVFMALRIIWLN
LLVPDAESHRLIALTNSEANGLYKSLLIGAGVSLFAVAFCLWMERLGLNEDAHKVALIGA
SALSMIILTGIAFAYRKAIARLIRGEGDVPVWRRVIAGSWHYIAIFYFVIAWGISAVRIL
LDLPDATGLVGAPLQVILLAAIVYGLLILIIDRVLLPRLDTADAQAKIAEDIQRAEENEG
SEQDEESAQAQARAEAAEREAMRSPFRDLFDRGAAIIVVFGAVDILANQWGVPLAGSGSL
IGSFIEVLLVVFLGYMAYEAVKIVIDRQIAKEAPAEKDEEAEVGGAGESRIATLLPIFRN
FLLITIVVIAAMVVLAELGVNIAPLFAGAGVVGLAIGFGAQTLIRDIFSGAFYLIDDAFR
KGEYIDIGSAKGMVEKISIRSMQLRHHRGALTTVPFGEIQQVENFSRDWAVMKLAFRVTY
DTDVEKMRKLIKNFGKELLEDEYYGPMFLAPLKSQGIMSMEDSAMIARVKFTTKPGKQFE
LRKIVYAGLRDLFEQNGIKFAHRQVTVRVAGEDGEAPSDAQRAAAAQAAAQAALAGGAAH
SSFDDLEGDNGGGGTDQI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcctcatacgctttcccgtcccctcaatctgaaacccgcccgcgtccggaat
gcgtttcggtttctgagtgtcctgttcaccgtcctgcttgttttcagcgccacatccctg
cctgtgcaggcacagggccttaccggcgtgatctccggcatggccgcgtcgggggagacg
gacgacaaggctgcaaacgacaaggtggccgccgaaacggctgacgacgaagccgcccat
gaagagggagacgaagaaggcgggggaattctcggttctgtcgatgagtttgcagatgag
gcggtggcggcaagggatgtcttcaaatccatcctgaaggaaattccgaccatccacgac
acgatgctggaaaccctgcaggacgaaggtgaagggcaggggctgagctggattcccacc
gcgctgatggacatcgtcatcgcagctgccttcggcattgcggcgtccatcctgcttgca
cgctggggccggcggcagtttgcctccatgtacaaggaggatgcctattcgcggtctgac
aagatcatctatctctatttgcgcgcgcttttgatgattgtcggcgtcgttctgttcttc
gccgtttcggttctggtctttcttttgatcgggtccggcctggaggctgccaacgaaacc
gccatggtggtgttcggtgtcgtcgctgtctttatggcgctcaggatcatctggctcaat
ctgctggtgcccgatgcagaaagtcatcggttgatcgctctgaccaactcggaagcgaac
ggtctgtacaagagcttgttgatcggcgcaggtgtctcgctgtttgcggttgctttctgt
ctctggatggaacgactcggattgaacgaggacgcgcacaaggtcgccctgatcggcgct
tcggccctgtccatgatcatcctgaccggcatcgccttcgcgtatcgcaaggccattgcc
cggttgatccggggcgagggggacgtgcccgtctggcggcgtgtcatcgcagggtcctgg
cactacatcgccatcttctatttcgtgattgcctggggcatttccgcggtccgtatcctg
cttgatcttccggatgccactgggctcgtcggcgctccgctccaggtgatcctgttggcg
gcgatcgtctatggcctcctgatcctgatcatcgaccgcgtgctgttgccacggctcgat
acggctgacgcgcaggcgaaaatcgcggaagacattcagcgggccgaagagaacgaaggc
agcgagcaggacgaggaaagcgcccaggcccaggcgcgtgcggaagccgccgaacgggaa
gcgatgcgatcccccttccgggatctgttcgaccgaggggctgcgatcatagtcgtcttc
ggtgccgtcgacatcctggccaatcaatggggcgtgccacttgccggcagcggctccctg
atcggatccttcatcgaggtgctgctggtcgtgttcctgggttatatggcctacgaggcg
gtcaagatcgtcatcgaccgtcagatcgccaaggaagcacctgcggagaaggacgaggaa
gcggaagttggcggagccggcgaaagcaggattgccaccctgctgccgatcttccgcaat
ttcctgctgatcaccatcgtcgtgattgcggccatggtggtcctggcggaactcggggtg
aacattgccccgctctttgccggtgccggtgttgtcggcctcgccatcggcttcggtgcc
cagaccctgatccgggacatcttctccggtgccttctacctgatcgacgatgcgttccgg
aaaggcgaatacatcgacatcggcagcgcgaagggcatggtcgagaaaatctcgatccga
tccatgcagctgcgccaccatcgcggtgcgctgacgacggttccgtttggcgaaatccag
caggtggagaatttctcacgcgactgggccgtcatgaagcttgccttccgggtgacatac
gacaccgacgttgagaagatgcgcaagctgatcaagaatttcggcaaggaactgcttgaa
gacgagtattacgggccgatgttcctggctccgctcaagtcccagggcatcatgtcgatg
gaagacagtgccatgatcgcgcgggtgaaattcaccaccaagccgggcaagcaattcgaa
ctgaggaagatcgtctatgccggccttcgggatctgtttgagcagaacggtatcaagttt
gcgcatcgccaggtgaccgtgcgggttgcaggggaagacggcgaagcaccctcggacgct
caacgggcggccgccgcgcaggccgccgcccaggcggcgctcgctggcggggcggcccat
agcagcttcgatgatcttgaaggagataatggggggggcggaaccgatcagatctga
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