Labrenzia sp. VG12: CHH27_09670
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Entry
CHH27_09670 CDS
T04984
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00240
Pyrimidine metabolism
labr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CHH27_09670
Enzymes [BR:
labr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
CHH27_09670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
ASP33482
UniProt:
A0A222F4M3
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All DBs
Position
2061791..2062720
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AA seq
309 aa
AA seq
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MTSPAPAALADLIVYNDEVRDALSTGKPVVALESTIITHGMPFPKNVETARQVEADIRAE
GAVPATIALMDGKIMVGLSDADLDRLAQAKDVMKCSRADLTFALATGRYGATTVAATMMA
AHAAGLKVFATGGIGGVHKGAEQSFDISADLDELGRTPVCVVSAGAKALLDIPKTLEVLE
TKGVPVIAYGTEELPAFWSRQSGLAAPYTLSSAEEIGALLKMRETFSDHGGVLIANPVPE
TDEIPRSEMTSYIDAAIAQAETDGIRGKEVTPYVLGAILDLTAGRSLDTNIALVRNNARL
AARIAAELV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagccctgccccggccgcgcttgcggatctgattgtttacaacgacgaagtccgt
gacgccctgtcgaccggcaaaccggtcgttgccctggaatccaccatcatcacccacggc
atgccgtttccgaaaaacgtcgagacggcacgacaggtcgaggccgacatccgggccgaa
ggtgccgtaccagcgaccatcgcgctgatggacggcaagatcatggtcggactgtccgac
gcggatctcgaccgcctcgcccaggccaaggatgtgatgaaatgctcgcgcgccgatctc
acgtttgccctggcgaccggccgctatggcgcgacaaccgtggccgcgaccatgatggcg
gcacatgctgccggcctgaaagtgtttgccaccggcggcattggcggcgttcacaagggc
gcggaacagagcttcgatatttccgcagacctcgatgaactcggccgtacgccggtctgc
gtcgtttccgctggcgccaaggccctgcttgatattcccaagaccctggaagtgcttgaa
accaagggcgtcccggtcattgcctatggcacggaagagctgccggcattctggtcacgc
cagagcggccttgccgcgccatacaccctcagctccgctgaagagatcggcgcgcttttg
aagatgcgggaaaccttttccgatcacggcggcgtcctgatcgccaacccggtgccggag
acggacgagattccgcgctctgaaatgaccagctacatcgatgcggccatcgcacaggcc
gagacagacggcatccgcggcaaggaagtcacgccatatgttcttggcgccatccttgat
ctgacggcaggccgcagcctcgacaccaacatcgctcttgtgcgcaacaatgcgcggctt
gcagcgcgcattgcagccgagctggtctga
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