Labrenzia sp. VG12: CHH27_15535
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Entry
CHH27_15535 CDS
T04984
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CHH27_15535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
OVT1
Motif
Other DBs
NCBI-ProteinID:
ASP34483
UniProt:
A0A222F8E2
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Position
3374948..3377389
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AA seq
813 aa
AA seq
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MASVPTSDTTLPATKAPAGAETALRIAHRIANEIGCKAGQVNATVQMLDEGSTVPFIARY
RKEATGGLDDSQLRKLEERLIYLRELEDRRVAITKSIEEQGKLTDDLTNSIQAAETKSQL
EDIYLPFKKKRRTKAQIAREAGLEPLADLLLSDPSRDPETEAKAFFDDGKGIADTKAALD
GARQILMERFAENAELVGRLRRHVEERGVVQSKLIDGMADKGAKFTDYFDYSEKWSKIPS
HRALALFRGRNEGILSVDLTVDDDDVSPVLPAVRMVADTYGIADRGRPADKWLMEAARFA
WKVKLALHLELDLMGVLRDKAEEEAIQVFARNLKDLLLAAPAGARATLGLDPGIRTGVKV
AVVDETGKLVDTATIYPFQPRNDLTGSRATLMALIAKHKVGLIAIGNGTASRETDKLAGD
VLSDIPSAQRPVKVIVNEAGASVYSASELAAREMPDIDVSLRGAASIARRLQDPLAELVK
IEPKSIGVGQYQHDVNQSKLARALDAVVEDAVNAVGVDLNTASPALLSRISGLSDSLAKA
VVEHRDSIGRFEKRSQLKDVPRLGAKAFELCAGFLRITDGKEPLDASSVHPEAYPLAKRI
VKACGRDLRQIMGDASLLSGLDPAEFTDDTFGLPTVKDILSELEKPGRDPRPEFKTAALQ
DGVEEIKDLKPGMKLEGTVTNVTNFGAFVDVGVHQDGLVHVSQLADRFVDDPHKIVKAGD
IVKVTILEVDVPRKRISMTMKSQADYQGQRERGQQDRGGRGPGGPGSKGPGGRGPGGSGP
RGGKGEAPKGSGGDGGNNAMAAALAAAMNKKRK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgttcccacctctgacaccacccttcctgccaccaaggcacctgccggcgcc
gaaacggcgctgcgcatcgcacaccggatagcgaacgaaatcggctgcaaggccggtcag
gtcaacgccaccgttcagatgctcgatgaaggttcgaccgtgcccttcatcgcccgctac
cgcaaggaagccaccggcggcctggatgacagccagctgcgcaaactggaagagcgcctg
atctaccttcgggagcttgaggacagacgcgttgccattacaaagtcgatcgaagagcag
ggcaagctcaccgacgatctgacgaacagcatacaggccgcagagaccaagtcccagctg
gaagacatctatctgccgttcaagaaaaagcgccgcacgaaagcccagatcgcccgcgag
gccggcctggaaccactggcggacctgctcctgtccgatccctcaagggacccggaaacg
gaagcgaaggcctttttcgatgacggcaagggcattgccgacaccaaggcggctctcgac
ggggcccgccagatcctgatggaacgctttgccgagaacgccgagctggtcggccggctg
cgccgtcatgtcgaggagcgcggcgtcgtgcagtcgaaactgattgacggcatggccgac
aagggcgccaaattcaccgactatttcgactattcggaaaaatggtcgaagatccccagc
caccgggcgcttgccctctttcgtggacgcaacgaaggcattctctccgtcgacctgacg
gtcgatgacgatgacgtttcaccggtgctcccggccgtcaggatggtcgccgacacatac
gggatagccgatcgtggccggccggcagacaagtggctgatggaagcggcccgctttgcc
tggaaggtgaaactcgcgcttcatctggaactcgacctgatgggggtcttgcgagacaag
gccgaagaagaggcaatccaggtctttgcccgcaacctcaaggaccttctgctcgccgct
ccggccggcgccagggcgacgcttggccttgacccgggcattcgcacgggtgtcaaggtg
gccgtggtcgacgaaaccggcaagcttgtcgacacagcaaccatctatccgtttcagccg
cggaacgatttgaccggttccagggcaacgctcatggcactgatcgccaagcacaaggtc
ggcctgatcgccatcggcaacggcacggccagccgcgagaccgataaactggccggcgat
gtactctcagacattccgtccgctcagcgcccggtgaaggtgatcgtcaacgaggccggt
gcctcggtctattccgcatccgaactggcggcaagggaaatgccggatatcgatgtctcc
ctgcgcggcgcagcgtcgattgcccggcgtctgcaggatccactggccgaactggtcaag
atcgaaccgaaatccatcggcgtcggccagtatcagcacgacgtcaaccagagcaagctt
gcccgcgcgctggatgccgttgtcgaagacgcggtgaacgccgtcggcgtcgatctcaac
accgcttccccggccctgctgtcgcgcatctccggtctttccgacagccttgccaaggcg
gtcgtcgaacaccgggactccatcggccgcttcgaaaagcgctcgcagctgaaggacgtg
ccacgtctcggcgccaaggcctttgaactctgcgcaggtttcctgcgcatcaccgacggc
aaggaaccgctggacgcctcctctgtgcacccggaggcctacccgctggccaagcgcatc
gtgaaagcctgcggccgggacctgcgccagatcatgggcgacgcttcacttctgagcggc
ctcgacccggctgaattcaccgacgacactttcggcctgccgacggtgaaggatatcctg
tcggaactggaaaagcccggccgtgacccgcgcccggaattcaagacggcggcgctccag
gacggtgtcgaggagatcaaggacctgaaacccggcatgaagctggaaggcacggtcacc
aacgtcaccaatttcggcgcctttgtcgatgtcggcgtacaccaggacgggctggtgcat
gtctcgcagctcgcagaccgtttcgtcgacgacccgcacaagatcgtcaaggccggagac
atcgtcaaggtgaccatcctggaggtggacgtgccgcgcaagcgcatttccatgaccatg
aaatcccaggccgactaccagggtcagcgcgaacggggccagcaggatcgcggtggccgc
ggaccgggcggtccgggaagcaagggcccgggtggacgtggtcccggcggctcgggaccg
cgtggcggcaagggcgaggcgccaaaaggatccggtggcgatggcggcaacaatgccatg
gcggcagccctggccgcggccatgaacaagaagcggaagtga
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