Labrenzia sp. VG12: CHH27_15650
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Entry
CHH27_15650 CDS
T04984
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_15650
Transporters [BR:
labr02000
]
Other transporters
Pores ion channels [TC:
1
]
CHH27_15650
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF6703
Motif
Other DBs
NCBI-ProteinID:
ASP34500
LinkDB
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Position
complement(3397520..3399817)
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AA seq
765 aa
AA seq
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MTFLRTCLLAVAVLLFQAPTPALAQDTKGETAGDAQATTQEVDQANEALIKVLSDPDSRA
AFLELLKKSSTDPSSGAADTAAGSTGEQEPEAQDAAKSESFVIRVGEYTRAVADEVGVLI
DRAGHSLKGLLLILQGDIPVKWDRVQGVISQVVAVLVSAYLAFFVGQYVAKKLYPKLQLR
ARYGGGLMRSFILLLTSAIDALTVALGLGVGYFVALLAYGGFEAGVTLQESLALNAFFIT
GMANVSLRFVFAPNRPELRLLPFDDASSNYWYARLRLYMYWINYGVFLAVPVANLAVSFV
LGNALRFLIVLSGMLYLMVLIKRNRVRVREGTRRYAETLQSMLAQRAVSNLGDLWHIGAL
GYIIAVFVVWVTRPFDATTIILRATGLSIVTIMAGMVISLVMTKAIKGGIRLPDSVQQKL
PALQYRLNAFVPRLLKIIRAVVFAGTVLLLLDIWGLIGVIDWFNSDVGVRLVSSYGSAFF
VLLVAFVIWLAVMSWVDLRLQSRAGYIVTARERTLFQLFRNAATIIIIVMAILLSLSEIG
VDIGPLIAGAGVVGLAISFGAQTLVKDIITGAFIQIENAINEGDVVTVAGITGTVEGITI
RSVRMRDLNGTTHIIPFSSVDMVSNFMRGFSYHVALIGVSYDTDIVKAKEAMIEAFERLK
KTDFGPKIVGDFEMHGVTNFGASSIDIRARIKTTPGDQWGIGRAYNEFVKQVFDERDIEI
PFPQVTYHAATPPFAEDEPKQKQRRKLPPSAGELADDAPADDGEH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgacattcttgcgaacctgtcttcttgccgttgcagtgctcctgttccaggctcccaca
cctgcgttggcgcaagacacgaagggcgagactgccggggacgcgcaagcgacgacgcag
gaagtcgatcaggcgaacgaggcgctgatcaaggtgctcagcgatccggacagtcgggcg
gcgtttctggaactcctgaaaaagagcagtactgatccgtcgtcgggagcagcggacacc
gcagcaggttccacgggcgaacaggagccggaggcgcaggacgccgccaagagcgaaagc
tttgtcattcgagtcggagagtatacgcgtgctgttgcagacgaggtgggcgttctcatc
gatcgggccgggcactccctgaaggggctgttgttgatcctgcaaggcgacattccggtc
aaatgggaccgggtgcagggtgtcatcagtcaggtcgttgccgtgcttgtcagtgcctat
ctcgccttcttcgtcggtcaatacgtggcaaaaaagctataccccaaactgcagcttcgg
gcccgctacggaggcggcctgatgcgcagtttcatcctcttgctgacatcggccattgac
gcgttgaccgtcgcgctcggtctgggggtcggctatttcgtcgccttgctggcatatgga
gggtttgaggccggcgtcacgcttcaggagagcttggcactaaatgcctttttcatcacg
ggcatggccaacgtgtctctcaggttcgtattcgcacccaaccggccggaattgcggctg
ctgcctttcgatgatgccagttcaaactactggtacgcgcgcctgcggctttatatgtac
tggatcaactacggcgttttcctggcggttccggttgccaatctggccgtctccttcgtt
ttgggcaatgcgctgcgcttcctgattgttctcagcggcatgctttacctgatggttctg
atcaagcggaaccgcgtaagggtccgtgaagggacaaggcgctacgcggaaactctgcag
agcatgcttgctcaaagagccgtctcgaacctcggcgatctctggcacatcggcgcgctg
gggtacatcattgcggtctttgttgtctgggtgacgcgtccatttgatgcgacaacaatc
atcctgcgcgccacgggcctctcgatcgtgacaatcatggccggcatggtgatttcgctt
gtgatgacgaaggccatcaagggcggtatccggttgccggacagcgttcagcaaaaactt
ccggccctgcagtaccgtctgaatgcctttgttccccggctcctgaagatcattcgcgcc
gttgtctttgccggaacggttctgctcctgctcgacatctgggggctcatcggggtcatc
gactggttcaacagcgatgtcggggtgcggcttgtcagcagctacggctcggccttcttt
gtgttgctggtcgccttcgtgatctggctggctgtgatgtcctgggtggacctgcgtctg
caatcgcgcgccggttacatcgtcaccgcgcgggagcggacgctgtttcagctgtttcgg
aatgcggccacgatcatcatcatcgtcatggccatccttctgtctctttctgaaatcggc
gtcgatatcgggccgctgattgccggtgccggtgtggtcggtctggccatttccttcggc
gcgcagaccctggtcaaggacatcatcacgggcgccttcattcagatcgaaaatgcaatc
aacgagggcgacgtggtgacggtggccggcatcaccggcacggtggaaggtatcaccatc
cgttcggtgcgcatgcgcgacctgaatggcaccacgcatatcatcccgttttcatccgtc
gacatggtgtccaacttcatgcgcggcttctcttaccatgtggcgctgatcggcgtgtcc
tacgacacggatatcgtcaaggcgaaagaggcgatgatcgaggcattcgaacgtctgaag
aaaacggatttcggaccgaagatcgtcggcgacttcgaaatgcatggcgtgaccaatttc
ggtgccagctcgatcgatatccgggcccggatcaagaccaccccgggagatcagtggggg
atcgggcgggcctataatgaattcgtcaagcaggtgttcgatgaacgcgacatcgaaatt
ccgttcccgcaggtcacctatcacgctgcgacgccgccctttgcggaagacgaacccaaa
cagaaacagcgtcgcaaattgccaccgagcgcaggcgaactggccgacgatgcgccggcg
gacgatggtgaacactga
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