Labrenzia sp. VG12: CHH27_15765
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Entry
CHH27_15765 CDS
T04984
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
labr03021
]
CHH27_15765 (rpoH)
Transcription machinery [BR:
labr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHH27_15765 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_11
GntR
NirdL-like_HTH
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
ASP34520
UniProt:
A0A222F6Z1
LinkDB
All DBs
Position
3421558..3422445
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AA seq
295 aa
AA seq
DB search
MAQNVPTLTAGEGGLSRYLDEIRKFPMLQPQEEYMLAKRYKEHEDPEAAERLVNSHLRLV
AKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSW
SLVKMGTTANQKRLFFNLRRLKGKIQALDEGDLKPHQVKEIATRLGVSEEEVISMNRRLG
GDASLNAPVRAEADAGEWQDWLVDEGDSQETLLANQEELDMRRKMLSEAMDVLNDRERRI
FEARRLAEDPMTLEDLSGEFGVSRERVRQIEVRAFEKVQKAVRNSARTMDQQPAT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaacgtaccgacgctcacagccggggaaggcggccttagccgttacctggac
gagattcgcaagtttcccatgctgcagccgcaggaagagtacatgctcgccaagcgctac
aaggagcatgaggaccctgaagctgccgaaagactggtcaactcccacctgcgcctcgtc
gccaagatcgccatgggctaccgcggctacggcctgccgatcggagaagttgtctccgag
ggcaatgtcggcctgatgcaggcggtcaagcgcttcgagccggacaagggtttccgcctg
gcaacctacgccatgtggtggatcaaggccgctattcaggaatacattctgcgctcctgg
tcgctggtcaagatgggcaccacggccaaccagaaacgcctgttcttcaacctccgccgc
ctcaagggcaagatccaggccctggacgagggtgatctgaagccgcatcaggtgaaggag
atcgcgacgcgtctgggcgtcagcgaggaagaagtgatttccatgaaccgccgcctgggt
ggcgacgccagcctgaacgcacctgtgcgcgctgaggcggacgccggcgaatggcaggac
tggcttgttgacgaaggcgacagccaggaaacgctgcttgccaaccaggaagagctcgac
atgcgtcgcaagatgctgagcgaggccatggatgtgctcaatgatcgcgaacggcgcatc
ttcgaagcccggcgccttgccgaagacccgatgaccctggaggatctctccggcgaattc
ggtgtcagccgcgagcgcgtgcgccagatcgaggttcgcgcctttgaaaaggtccagaag
gccgtgcgcaacagcgcccgcaccatggaccagcaaccggcaacctga
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