Labrenzia sp. VG12: CHH27_16140
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Entry
CHH27_16140 CDS
T04984
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00010
Glycolysis / Gluconeogenesis
labr00020
Citrate cycle (TCA cycle)
labr00260
Glycine, serine and threonine metabolism
labr00280
Valine, leucine and isoleucine degradation
labr00310
Lysine degradation
labr00380
Tryptophan metabolism
labr00620
Pyruvate metabolism
labr00630
Glyoxylate and dicarboxylate metabolism
labr00640
Propanoate metabolism
labr00670
One carbon pool by folate
labr00785
Lipoic acid metabolism
labr01100
Metabolic pathways
labr01110
Biosynthesis of secondary metabolites
labr01120
Microbial metabolism in diverse environments
labr01200
Carbon metabolism
labr01210
2-Oxocarboxylic acid metabolism
labr01240
Biosynthesis of cofactors
Module
labr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
labr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
labr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
labr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
labr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CHH27_16140 (lpdA)
00020 Citrate cycle (TCA cycle)
CHH27_16140 (lpdA)
00620 Pyruvate metabolism
CHH27_16140 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CHH27_16140 (lpdA)
00640 Propanoate metabolism
CHH27_16140 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHH27_16140 (lpdA)
00280 Valine, leucine and isoleucine degradation
CHH27_16140 (lpdA)
00310 Lysine degradation
CHH27_16140 (lpdA)
00380 Tryptophan metabolism
CHH27_16140 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CHH27_16140 (lpdA)
00670 One carbon pool by folate
CHH27_16140 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labr04147
]
CHH27_16140 (lpdA)
Enzymes [BR:
labr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CHH27_16140 (lpdA)
Exosome [BR:
labr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CHH27_16140 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_binding_3
DAO
Pyr_redox_3
FAD_binding_2
UDPG_MGDP_dh_N
GIDA
NAD_binding_8
HI0933_like
FAD_oxidored
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ASP34582
UniProt:
A0A222F7S1
LinkDB
All DBs
Position
3495054..3496412
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AA seq
452 aa
AA seq
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MTDIKCKLLIIGAGPGGYVCAIRAGQLGIDTVVVDEAKPGGTCLNVGCIPSKALIHAADE
FFKITHADQGPLGIRAENPTIDLSKTIAWKDGLVDRLNSGVAALMKKAKARFVSGRARFL
DGKTVQVTGDGDPFHIRAEYIVVATGSAAVELPFLPFGGPIMSSTEALSLTEIPKTLAVV
GGGYIGLELGTVFAKLGSQVTIVEAEDSILPAYDKGLTKPVVKRLGELGVALMTGTRALG
HQGDTLQTDKGDVDAEKVLVTVGRRPRTIGIGIDELALTLDGPFIKIDKTCQTSMRGIYA
IGDVTGEPMLAHRAMAQGEMVAEHIAGQAVEWDRRAIPAVCFTDPELVLCGALPGELEGT
RSSEFPFQANGRAMTTEREDGFVRVVWREADHAIVGLQAVGTGVSELSAAFSLAIEMGAC
LEDLAGTIHAHPTQSEGLQEACLRALGHALHI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacggatatcaaatgcaagttgctgatcatcggcgccggacctggcggctatgtctgc
gccattcgcgccggacagctcggcatcgacacggtggttgtggacgaggcaaaaccgggt
ggcacctgcctgaatgttggctgcatcccctccaaggcgcttatccatgcggccgatgaa
ttcttcaagatcacccatgcggaccagggcccgctcggcattcgtgcggaaaacccgaca
atcgacctgtcgaagaccattgcctggaaagacgggctggtggacaggctgaattcaggt
gtcgcggccctcatgaagaaggccaaggcccgttttgtctcgggccgcgcccgttttctg
gatggcaaaacggtgcaggtcacgggcgacggcgaccccttccatattcgggcggaatac
atcgtcgtcgccacgggctccgctgccgttgaactgccctttctgccatttggtgggcca
atcatgtcctccacggaggccttgagcctcacggagatcccgaagacactcgccgttgtc
ggtggcggttatatcggactggagctgggcaccgtttttgccaaactcggcagccaggtc
acgattgtcgaagcagaagacagcattctgccagcatacgacaaaggcctgacaaaaccg
gtcgtcaaacgtctgggcgagctgggtgttgcgcttatgaccggcaccagggctctgggc
catcaaggcgacactcttcagaccgacaagggcgatgtcgacgctgaaaaggttctggtg
accgtaggccgcagaccccgcaccatcggcatcggcatcgacgagcttgcgctcaccctg
gacgggcccttcatcaagatcgacaagacctgccagacctccatgcgcggcatctatgcg
attggcgacgtcaccggtgagccgatgctggcgcatcgggcaatggcgcaaggggaaatg
gttgccgaacacatcgccggccaggccgttgaatgggacaggcgtgccatcccggctgtc
tgtttcacggaccccgaactcgtgctgtgcggtgccttgcctggcgaactcgagggaacc
aggtcgagcgagtttccgttccaggccaacgggcgggcgatgacaaccgaacgggaagac
ggttttgtccgtgttgtctggcgcgaggccgatcatgcgattgtcggccttcaggcggtg
ggaaccggcgtctctgaattgtccgcagccttttccctggcgatcgagatgggcgcttgc
ctggaagaccttgcaggaaccatccatgcccaccccacccagtccgagggactgcaggaa
gcctgtctgcgcgccctggggcacgcgctccatatctag
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