Labrenzia sp. VG12: CHH27_16190
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Entry
CHH27_16190 CDS
T04984
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_16190
Transporters [BR:
labr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CHH27_16190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
HUTI_composite_bact
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_21
AAA_25
nSTAND1
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ASP34588
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Position
3504169..3505977
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AA seq
602 aa
AA seq
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MADAPVSDRKTDTKTNRRSLKPLTRLIPYLQKHKGMAIGALVALFSAAIITLILPAAVRR
MIDFGFGADDPALVNSYFAVLIGVVCALATASSIRYFLVMWIGERVVAELRSDVFAHLTR
LSPAFYDSAKSGEILSRLTADTTQIKSAFGASASQAMRNLIMFAGASVMMVVTSPRLSVI
VLAAIPVILVPILGFGRQVRKRSRFAQDTLADASAYAGEMLGSVKTLQAFTHEDRSAGRY
GGAVEEAFKAARKAIMARAALTGFAIMVIGASIVAVLWIGASDVFSGRITGGELSQFLLY
SILAAGSLATLSEVWGELSQAAGAAERLSELLDVQSEIRAPANPVSLPESPRGDIAFENV
SFAYQNAEHMPVVRDLELTIAPGETVAVVGPSGAGKSTLFSLLMRFYDPVSGTIRLNGVG
LSELDPEDLRRHIALVPQDTAIFGASIAENIAYGRPDASREDVVAAAQAALAAPFIEAMA
DGYDTMVGERGVTLSGGQRQRIAIARAVLKDAPVLLLDEATSALDAESERLVQQALDKLM
EGRTTLVIAHRLATVLKADRIVVMEDGRIVETGTHAELTAAGGLYAKLARLQFDAEQEAL
AG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgcccctgtttcagaccgcaagacggacacaaagaccaatcgccgttcgtta
aaaccgctgacgcggctgatcccctatcttcagaaacacaagggcatggccatcggtgca
ctggtcgccctgttctcggccgcaatcatcacgctgatcctgccggccgccgttcgccgc
atgatcgactttggctttggcgccgacgacccggcgctggtgaattcctatttcgccgtc
ctgatcggcgtggtctgcgccctggcaacggccagttcgatccgctacttcctggtcatg
tggatcggtgagcgggttgttgccgaacttcgctccgatgtctttgcccacctgacccgg
ctcagccccgccttttacgacagcgccaagtccggcgagatcctgtcgcgcctgaccgcc
gatacgacccagatcaagtcagcatttggcgccagcgcctcccaggcgatgcgtaacctg
atcatgttcgccggcgcctcggtgatgatggtggtcaccagcccgcgtctctccgtgatc
gtgctggctgccattcccgtcattctcgttcccattctcgggtttggtcgtcaggttcgc
aaacgctcgcgctttgcccaggataccctggcagatgcctccgcctatgccggcgagatg
ctgggttcggtgaaaaccctgcaggcgttcacgcatgaagacagaagcgccgggcgctac
ggcggcgccgtcgaggaggctttcaaggctgcccgcaaggccatcatggcgcgcgcggca
ttgaccggctttgccatcatggtgatcggcgccagcatcgttgcggtcctgtggatcggg
gccagcgacgtgttttccggccgcatcacagggggggaactcagccagttcctgctctac
tccattctcgccgccgggtcgctggcaacgctttccgaggtctggggcgaactctcccag
gccgccggtgccgctgagcgcctgtcggagcttctggatgtgcagtcggaaatccgcgcc
cccgccaatccggtcagcctgccggagagcccgcgcggagacattgccttcgaaaacgtc
tccttcgcctatcagaatgcggaacacatgccggtggtccgggatctggagctgaccatc
gcgccgggagaaaccgttgctgtcgtcggtccgtccggtgccggcaagtccaccttgttc
agcctgctgatgcgcttttacgacccggtttccgggacgatccggctcaatggtgtaggc
ctgagcgagcttgatccggaagatctgcgccgacacatcgccctggtgccccaggacaca
gcgattttcggggccagcattgccgagaacattgcctatggcaggcctgacgccagccgg
gaagacgtggttgcagcggcacaggctgccctggccgcccccttcatcgaggcgatggcg
gatggctatgacacgatggtcggcgagcgcggtgtcactctctctggtggacaacgccag
cgcattgccattgcccgcgccgtcctgaaagacgctccggtcctgctcctggatgaagcg
acgagcgcgcttgacgcggagagcgaacggctggtgcagcaggcgctcgacaagctgatg
gaaggccgcacgacgctggtgattgcccaccgtctggcaacggtcctgaaggccgaccgg
attgtggtgatggaagacggccgcatcgtcgaaaccggcacacatgccgagctaacggcc
gccggcgggctctacgccaagctggcccggctgcaattcgatgccgagcaggaggctctg
gcggggtag
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